Gene : AT3G03940 A. thaliana TAIR10
Defline:  (1 of 3) PTHR11909//PTHR11909:SF131 - CASEIN KINASE-RELATED // CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  335
Name:  ? AT3G03940 Secondary Identifier:  ? PAC:19663042
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03940 0.5kb upstream 0.5kb upstream 5700 true Chr3: 1014025-1019724 Arabidopsis thaliana
AT3G03940 0.5kb upstream 0.5kb upstream 500 false Chr3: 1019225-1019724 Arabidopsis thaliana
AT3G03940 0.5kb downstream 0.5kb downstream 5700 true Chr3: 1013525-1019224 Arabidopsis thaliana
AT3G03940 0.5kb downstream 0.5kb downstream 500 false Chr3: 1013525-1014024 Arabidopsis thaliana
AT3G03940 1.0kb upstream 1.0kb upstream 6200 true Chr3: 1014025-1020224 Arabidopsis thaliana
AT3G03940 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1019225-1020224 Arabidopsis thaliana
AT3G03940 1.0kb downstream 1.0kb downstream 6200 true Chr3: 1013025-1019224 Arabidopsis thaliana
AT3G03940 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1013025-1014024 Arabidopsis thaliana
AT3G03940 2.0kb upstream 2.0kb upstream 7200 true Chr3: 1014025-1021224 Arabidopsis thaliana
AT3G03940 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1019225-1021224 Arabidopsis thaliana
AT3G03940 2.0kb downstream 2.0kb downstream 7200 true Chr3: 1012025-1019224 Arabidopsis thaliana
AT3G03940 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1012025-1014024 Arabidopsis thaliana
AT3G03940 5.0kb upstream 5.0kb upstream 10200 true Chr3: 1014025-1024224 Arabidopsis thaliana
AT3G03940 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1019225-1024224 Arabidopsis thaliana
AT3G03940 5.0kb downstream 5.0kb downstream 10200 true Chr3: 1009025-1019224 Arabidopsis thaliana
AT3G03940 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1009025-1014024 Arabidopsis thaliana
AT3G03940 10.0kb upstream 10.0kb upstream 15200 true Chr3: 1014025-1029224 Arabidopsis thaliana
AT3G03940 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1019225-1029224 Arabidopsis thaliana
AT3G03940 10.0kb downstream 10.0kb downstream 15200 true Chr3: 1004025-1019224 Arabidopsis thaliana
AT3G03940 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1004025-1014024 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122369650 5261 Brassicaceae View MSA
123829389 5264 Brassicales-Malvales View MSA
124351614 5266 SBM View MSA
124239017 5268 Malvidae View MSA
124066133 5270 Rosid View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.019        
cufflinks 19.303        
cufflinks 17.618       Low
cufflinks 20.48        
cufflinks 19.174        
cufflinks 20.797       High

0 Strain