Gene : AT3G02450 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED Genomic Order:  169
Name:  ? AT3G02450 Secondary Identifier:  ? PAC:19664490
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02450 0.5kb upstream 0.5kb upstream 3024 true Chr3: 502707-505730 Arabidopsis thaliana
AT3G02450 0.5kb upstream 0.5kb upstream 500 false Chr3: 505231-505730 Arabidopsis thaliana
AT3G02450 0.5kb downstream 0.5kb downstream 3024 true Chr3: 502207-505230 Arabidopsis thaliana
AT3G02450 0.5kb downstream 0.5kb downstream 500 false Chr3: 502207-502706 Arabidopsis thaliana
AT3G02450 1.0kb upstream 1.0kb upstream 3524 true Chr3: 502707-506230 Arabidopsis thaliana
AT3G02450 1.0kb upstream 1.0kb upstream 1000 false Chr3: 505231-506230 Arabidopsis thaliana
AT3G02450 1.0kb downstream 1.0kb downstream 3524 true Chr3: 501707-505230 Arabidopsis thaliana
AT3G02450 1.0kb downstream 1.0kb downstream 1000 false Chr3: 501707-502706 Arabidopsis thaliana
AT3G02450 2.0kb upstream 2.0kb upstream 4524 true Chr3: 502707-507230 Arabidopsis thaliana
AT3G02450 2.0kb upstream 2.0kb upstream 2000 false Chr3: 505231-507230 Arabidopsis thaliana
AT3G02450 2.0kb downstream 2.0kb downstream 4524 true Chr3: 500707-505230 Arabidopsis thaliana
AT3G02450 2.0kb downstream 2.0kb downstream 2000 false Chr3: 500707-502706 Arabidopsis thaliana
AT3G02450 5.0kb upstream 5.0kb upstream 7524 true Chr3: 502707-510230 Arabidopsis thaliana
AT3G02450 5.0kb upstream 5.0kb upstream 5000 false Chr3: 505231-510230 Arabidopsis thaliana
AT3G02450 5.0kb downstream 5.0kb downstream 7524 true Chr3: 497707-505230 Arabidopsis thaliana
AT3G02450 5.0kb downstream 5.0kb downstream 5000 false Chr3: 497707-502706 Arabidopsis thaliana
AT3G02450 10.0kb upstream 10.0kb upstream 12524 true Chr3: 502707-515230 Arabidopsis thaliana
AT3G02450 10.0kb upstream 10.0kb upstream 10000 false Chr3: 505231-515230 Arabidopsis thaliana
AT3G02450 10.0kb downstream 10.0kb downstream 12524 true Chr3: 492707-505230 Arabidopsis thaliana
AT3G02450 10.0kb downstream 10.0kb downstream 10000 false Chr3: 492707-502706 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374526 5261 Brassicaceae View MSA
123833996 5264 Brassicales-Malvales View MSA
124339955 5266 SBM View MSA
124238677 5268 Malvidae View MSA
124063018 5270 Rosid View MSA
123737747 5271 Pentapetalae View MSA
122793170 5272 Eudicot View MSA
122045675 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344954 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.056     High  
cufflinks 7.562        
cufflinks 34.369     High High
cufflinks 7.378        
cufflinks 24.638        
cufflinks 5.947       Low

0 Strain