Gene : IBR3 A. thaliana TAIR10
Primary Identifier:  ? AT3G06810 Defline:  (1 of 1) K00249 - acyl-CoA dehydrogenase (ACADM, acd)
Genomic Order:  666 Name:  ? AT3G06810
Secondary Identifier:  ? PAC:19664525
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06810 0.5kb upstream 0.5kb upstream 4997 true Chr3: 2145835-2150831 Arabidopsis thaliana
AT3G06810 0.5kb upstream 0.5kb upstream 500 false Chr3: 2145835-2146334 Arabidopsis thaliana
AT3G06810 0.5kb downstream 0.5kb downstream 4997 true Chr3: 2146335-2151331 Arabidopsis thaliana
AT3G06810 0.5kb downstream 0.5kb downstream 500 false Chr3: 2150832-2151331 Arabidopsis thaliana
AT3G06810 1.0kb upstream 1.0kb upstream 5497 true Chr3: 2145335-2150831 Arabidopsis thaliana
AT3G06810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2145335-2146334 Arabidopsis thaliana
AT3G06810 1.0kb downstream 1.0kb downstream 5497 true Chr3: 2146335-2151831 Arabidopsis thaliana
AT3G06810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2150832-2151831 Arabidopsis thaliana
AT3G06810 2.0kb upstream 2.0kb upstream 6497 true Chr3: 2144335-2150831 Arabidopsis thaliana
AT3G06810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2144335-2146334 Arabidopsis thaliana
AT3G06810 2.0kb downstream 2.0kb downstream 6497 true Chr3: 2146335-2152831 Arabidopsis thaliana
AT3G06810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2150832-2152831 Arabidopsis thaliana
AT3G06810 5.0kb upstream 5.0kb upstream 9497 true Chr3: 2141335-2150831 Arabidopsis thaliana
AT3G06810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2141335-2146334 Arabidopsis thaliana
AT3G06810 5.0kb downstream 5.0kb downstream 9497 true Chr3: 2146335-2155831 Arabidopsis thaliana
AT3G06810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2150832-2155831 Arabidopsis thaliana
AT3G06810 10.0kb upstream 10.0kb upstream 14497 true Chr3: 2136335-2150831 Arabidopsis thaliana
AT3G06810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2136335-2146334 Arabidopsis thaliana
AT3G06810 10.0kb downstream 10.0kb downstream 14497 true Chr3: 2146335-2160831 Arabidopsis thaliana
AT3G06810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2150832-2160831 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366173 5261 Brassicaceae View MSA
123832716 5264 Brassicales-Malvales View MSA
124345374 5266 SBM View MSA
124237592 5268 Malvidae View MSA
124067051 5270 Rosid View MSA
123746670 5271 Pentapetalae View MSA
122792276 5272 Eudicot View MSA
122041962 5273 Angiosperm View MSA
121347351 5274 Embryophyte View MSA
123424098 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.384        
cufflinks 14.794        
cufflinks 12.951        
cufflinks 15.608        
cufflinks 16.151       High
cufflinks 12.526       Low

0 Strain