Gene : AT3G26380 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11452//PTHR11452:SF14 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // ALPHA-GALACTOSIDASE A Genomic Order:  2778
Name:  ? AT3G26380 Secondary Identifier:  ? PAC:19663846
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-1301 Arabidopsis thaliana pathologic  
Athaliana PWY-6527 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26380 0.5kb upstream 0.5kb upstream 3734 true Chr3: 9659565-9663298 Arabidopsis thaliana
AT3G26380 0.5kb upstream 0.5kb upstream 500 false Chr3: 9659565-9660064 Arabidopsis thaliana
AT3G26380 0.5kb downstream 0.5kb downstream 3734 true Chr3: 9660065-9663798 Arabidopsis thaliana
AT3G26380 0.5kb downstream 0.5kb downstream 500 false Chr3: 9663299-9663798 Arabidopsis thaliana
AT3G26380 1.0kb upstream 1.0kb upstream 4234 true Chr3: 9659065-9663298 Arabidopsis thaliana
AT3G26380 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9659065-9660064 Arabidopsis thaliana
AT3G26380 1.0kb downstream 1.0kb downstream 4234 true Chr3: 9660065-9664298 Arabidopsis thaliana
AT3G26380 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9663299-9664298 Arabidopsis thaliana
AT3G26380 2.0kb upstream 2.0kb upstream 5234 true Chr3: 9658065-9663298 Arabidopsis thaliana
AT3G26380 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9658065-9660064 Arabidopsis thaliana
AT3G26380 2.0kb downstream 2.0kb downstream 5234 true Chr3: 9660065-9665298 Arabidopsis thaliana
AT3G26380 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9663299-9665298 Arabidopsis thaliana
AT3G26380 5.0kb upstream 5.0kb upstream 8234 true Chr3: 9655065-9663298 Arabidopsis thaliana
AT3G26380 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9655065-9660064 Arabidopsis thaliana
AT3G26380 5.0kb downstream 5.0kb downstream 8234 true Chr3: 9660065-9668298 Arabidopsis thaliana
AT3G26380 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9663299-9668298 Arabidopsis thaliana
AT3G26380 10.0kb upstream 10.0kb upstream 13234 true Chr3: 9650065-9663298 Arabidopsis thaliana
AT3G26380 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9650065-9660064 Arabidopsis thaliana
AT3G26380 10.0kb downstream 10.0kb downstream 13234 true Chr3: 9660065-9673298 Arabidopsis thaliana
AT3G26380 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9663299-9673298 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364962 5261 Brassicaceae View MSA
123827886 5264 Brassicales-Malvales View MSA
124343227 5266 SBM View MSA
124238425 5268 Malvidae View MSA
124064341 5270 Rosid View MSA
123740921 5271 Pentapetalae View MSA
122794912 5272 Eudicot View MSA
122043993 5273 Angiosperm View MSA
121347299 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.497        
cufflinks 16.498       High
cufflinks 13.968        
cufflinks 14.283        
cufflinks 15.045        
cufflinks 13.864        

0 Strain