Gene : AT3G26115 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2749
Name:  ? AT3G26115 Secondary Identifier:  ? PAC:19661166
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26115 0.5kb upstream 0.5kb upstream 2600 true Chr3: 9541778-9544377 Arabidopsis thaliana
AT3G26115 0.5kb upstream 0.5kb upstream 500 false Chr3: 9541778-9542277 Arabidopsis thaliana
AT3G26115 0.5kb downstream 0.5kb downstream 2600 true Chr3: 9542278-9544877 Arabidopsis thaliana
AT3G26115 0.5kb downstream 0.5kb downstream 500 false Chr3: 9544378-9544877 Arabidopsis thaliana
AT3G26115 1.0kb upstream 1.0kb upstream 3100 true Chr3: 9541278-9544377 Arabidopsis thaliana
AT3G26115 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9541278-9542277 Arabidopsis thaliana
AT3G26115 1.0kb downstream 1.0kb downstream 3100 true Chr3: 9542278-9545377 Arabidopsis thaliana
AT3G26115 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9544378-9545377 Arabidopsis thaliana
AT3G26115 2.0kb upstream 2.0kb upstream 4100 true Chr3: 9540278-9544377 Arabidopsis thaliana
AT3G26115 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9540278-9542277 Arabidopsis thaliana
AT3G26115 2.0kb downstream 2.0kb downstream 4100 true Chr3: 9542278-9546377 Arabidopsis thaliana
AT3G26115 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9544378-9546377 Arabidopsis thaliana
AT3G26115 5.0kb upstream 5.0kb upstream 7100 true Chr3: 9537278-9544377 Arabidopsis thaliana
AT3G26115 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9537278-9542277 Arabidopsis thaliana
AT3G26115 5.0kb downstream 5.0kb downstream 7100 true Chr3: 9542278-9549377 Arabidopsis thaliana
AT3G26115 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9544378-9549377 Arabidopsis thaliana
AT3G26115 10.0kb upstream 10.0kb upstream 12100 true Chr3: 9532278-9544377 Arabidopsis thaliana
AT3G26115 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9532278-9542277 Arabidopsis thaliana
AT3G26115 10.0kb downstream 10.0kb downstream 12100 true Chr3: 9542278-9554377 Arabidopsis thaliana
AT3G26115 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9544378-9554377 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371433 5261 Brassicaceae View MSA
123830632 5264 Brassicales-Malvales View MSA
124342924 5266 SBM View MSA
124238214 5268 Malvidae View MSA
124062941 5270 Rosid View MSA
123740712 5271 Pentapetalae View MSA
122793656 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.691       High
cufflinks 1.792        
cufflinks 1.568        
cufflinks 1.609        
cufflinks 1.719        
cufflinks 1.326       Low

0 Strain