Gene : AT3G26040 A. thaliana TAIR10
Defline:  (1 of 6) 2.3.1.160 - Vinorine synthase Genomic Order:  2740
Name:  ? AT3G26040 Secondary Identifier:  ? PAC:19663359
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G26040 0.5kb upstream 0.5kb upstream 1830 true Chr3: 9519241-9521070 Arabidopsis thaliana
AT3G26040 0.5kb upstream 0.5kb upstream 500 false Chr3: 9519241-9519740 Arabidopsis thaliana
AT3G26040 0.5kb downstream 0.5kb downstream 1830 true Chr3: 9519741-9521570 Arabidopsis thaliana
AT3G26040 0.5kb downstream 0.5kb downstream 500 false Chr3: 9521071-9521570 Arabidopsis thaliana
AT3G26040 1.0kb upstream 1.0kb upstream 2330 true Chr3: 9518741-9521070 Arabidopsis thaliana
AT3G26040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9518741-9519740 Arabidopsis thaliana
AT3G26040 1.0kb downstream 1.0kb downstream 2330 true Chr3: 9519741-9522070 Arabidopsis thaliana
AT3G26040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9521071-9522070 Arabidopsis thaliana
AT3G26040 2.0kb upstream 2.0kb upstream 3330 true Chr3: 9517741-9521070 Arabidopsis thaliana
AT3G26040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9517741-9519740 Arabidopsis thaliana
AT3G26040 2.0kb downstream 2.0kb downstream 3330 true Chr3: 9519741-9523070 Arabidopsis thaliana
AT3G26040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9521071-9523070 Arabidopsis thaliana
AT3G26040 5.0kb upstream 5.0kb upstream 6330 true Chr3: 9514741-9521070 Arabidopsis thaliana
AT3G26040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9514741-9519740 Arabidopsis thaliana
AT3G26040 5.0kb downstream 5.0kb downstream 6330 true Chr3: 9519741-9526070 Arabidopsis thaliana
AT3G26040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9521071-9526070 Arabidopsis thaliana
AT3G26040 10.0kb upstream 10.0kb upstream 11330 true Chr3: 9509741-9521070 Arabidopsis thaliana
AT3G26040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9509741-9519740 Arabidopsis thaliana
AT3G26040 10.0kb downstream 10.0kb downstream 11330 true Chr3: 9519741-9531070 Arabidopsis thaliana
AT3G26040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9521071-9531070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362355 5261 Brassicaceae View MSA
123841238 5264 Brassicales-Malvales View MSA
124351472 5266 SBM View MSA
124254246 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.266        
cufflinks 1.813        
cufflinks 0.851       Low
cufflinks 3.085       High
cufflinks 1.08        
cufflinks 1.887        

0 Strain