Gene : AT3G25430 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15092:SF28 - POLY(A)-SPECIFIC RIBONUCLEASE PARN-LIKE Genomic Order:  2666
Name:  ? AT3G25430 Secondary Identifier:  ? PAC:19663077
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25430 0.5kb upstream 0.5kb upstream 3085 true Chr3: 9220686-9223770 Arabidopsis thaliana
AT3G25430 0.5kb upstream 0.5kb upstream 500 false Chr3: 9220686-9221185 Arabidopsis thaliana
AT3G25430 0.5kb downstream 0.5kb downstream 3085 true Chr3: 9221186-9224270 Arabidopsis thaliana
AT3G25430 0.5kb downstream 0.5kb downstream 500 false Chr3: 9223771-9224270 Arabidopsis thaliana
AT3G25430 1.0kb upstream 1.0kb upstream 3585 true Chr3: 9220186-9223770 Arabidopsis thaliana
AT3G25430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9220186-9221185 Arabidopsis thaliana
AT3G25430 1.0kb downstream 1.0kb downstream 3585 true Chr3: 9221186-9224770 Arabidopsis thaliana
AT3G25430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9223771-9224770 Arabidopsis thaliana
AT3G25430 2.0kb upstream 2.0kb upstream 4585 true Chr3: 9219186-9223770 Arabidopsis thaliana
AT3G25430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9219186-9221185 Arabidopsis thaliana
AT3G25430 2.0kb downstream 2.0kb downstream 4585 true Chr3: 9221186-9225770 Arabidopsis thaliana
AT3G25430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9223771-9225770 Arabidopsis thaliana
AT3G25430 5.0kb upstream 5.0kb upstream 7585 true Chr3: 9216186-9223770 Arabidopsis thaliana
AT3G25430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9216186-9221185 Arabidopsis thaliana
AT3G25430 5.0kb downstream 5.0kb downstream 7585 true Chr3: 9221186-9228770 Arabidopsis thaliana
AT3G25430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9223771-9228770 Arabidopsis thaliana
AT3G25430 10.0kb upstream 10.0kb upstream 12585 true Chr3: 9211186-9223770 Arabidopsis thaliana
AT3G25430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9211186-9221185 Arabidopsis thaliana
AT3G25430 10.0kb downstream 10.0kb downstream 12585 true Chr3: 9221186-9233770 Arabidopsis thaliana
AT3G25430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9223771-9233770 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371115 5261 Brassicaceae View MSA
123833049 5264 Brassicales-Malvales View MSA
124342814 5266 SBM View MSA
124241949 5268 Malvidae View MSA
124073330 5270 Rosid View MSA
123738401 5271 Pentapetalae View MSA
122796847 5272 Eudicot View MSA
122041531 5273 Angiosperm View MSA
121345225 5274 Embryophyte View MSA
123427620 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.497       Low
cufflinks 6.042       High
cufflinks 3.458        
cufflinks 5.433        
cufflinks 2.943        
cufflinks 4.602        

0 Strain