Gene : AT3G25490 A. thaliana TAIR10
Defline:  (1 of 8) PTHR27005:SF32 - F16F4.7 PROTEIN-RELATED Genomic Order:  2671
Name:  ? AT3G25490 Secondary Identifier:  ? PAC:19663950
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25490 0.5kb upstream 0.5kb upstream 2261 true Chr3: 9241225-9243485 Arabidopsis thaliana
AT3G25490 0.5kb upstream 0.5kb upstream 500 false Chr3: 9241225-9241724 Arabidopsis thaliana
AT3G25490 0.5kb downstream 0.5kb downstream 2261 true Chr3: 9241725-9243985 Arabidopsis thaliana
AT3G25490 0.5kb downstream 0.5kb downstream 500 false Chr3: 9243486-9243985 Arabidopsis thaliana
AT3G25490 1.0kb upstream 1.0kb upstream 2761 true Chr3: 9240725-9243485 Arabidopsis thaliana
AT3G25490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9240725-9241724 Arabidopsis thaliana
AT3G25490 1.0kb downstream 1.0kb downstream 2761 true Chr3: 9241725-9244485 Arabidopsis thaliana
AT3G25490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9243486-9244485 Arabidopsis thaliana
AT3G25490 2.0kb upstream 2.0kb upstream 3761 true Chr3: 9239725-9243485 Arabidopsis thaliana
AT3G25490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9239725-9241724 Arabidopsis thaliana
AT3G25490 2.0kb downstream 2.0kb downstream 3761 true Chr3: 9241725-9245485 Arabidopsis thaliana
AT3G25490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9243486-9245485 Arabidopsis thaliana
AT3G25490 5.0kb upstream 5.0kb upstream 6761 true Chr3: 9236725-9243485 Arabidopsis thaliana
AT3G25490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9236725-9241724 Arabidopsis thaliana
AT3G25490 5.0kb downstream 5.0kb downstream 6761 true Chr3: 9241725-9248485 Arabidopsis thaliana
AT3G25490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9243486-9248485 Arabidopsis thaliana
AT3G25490 10.0kb upstream 10.0kb upstream 11761 true Chr3: 9231725-9243485 Arabidopsis thaliana
AT3G25490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9231725-9241724 Arabidopsis thaliana
AT3G25490 10.0kb downstream 10.0kb downstream 11761 true Chr3: 9241725-9253485 Arabidopsis thaliana
AT3G25490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9243486-9253485 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344163 5261 Brassicaceae View MSA
123784204 5264 Brassicales-Malvales View MSA
124282401 5266 SBM View MSA
124251696 5268 Malvidae View MSA
124074886 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.277     Low  
cufflinks 0.018     Low Low
cufflinks 0.229     Low  
cufflinks 0.018     Low Low
cufflinks 0.381        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain