Gene : AT3G24480 A. thaliana TAIR10
Defline:  (1 of 3) PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Genomic Order:  2572
Name:  ? AT3G24480 Secondary Identifier:  ? PAC:19663186
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24480 0.5kb upstream 0.5kb upstream 1985 true Chr3: 8901154-8903138 Arabidopsis thaliana
AT3G24480 0.5kb upstream 0.5kb upstream 500 false Chr3: 8902639-8903138 Arabidopsis thaliana
AT3G24480 0.5kb downstream 0.5kb downstream 1985 true Chr3: 8900654-8902638 Arabidopsis thaliana
AT3G24480 0.5kb downstream 0.5kb downstream 500 false Chr3: 8900654-8901153 Arabidopsis thaliana
AT3G24480 1.0kb upstream 1.0kb upstream 2485 true Chr3: 8901154-8903638 Arabidopsis thaliana
AT3G24480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8902639-8903638 Arabidopsis thaliana
AT3G24480 1.0kb downstream 1.0kb downstream 2485 true Chr3: 8900154-8902638 Arabidopsis thaliana
AT3G24480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8900154-8901153 Arabidopsis thaliana
AT3G24480 2.0kb upstream 2.0kb upstream 3485 true Chr3: 8901154-8904638 Arabidopsis thaliana
AT3G24480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8902639-8904638 Arabidopsis thaliana
AT3G24480 2.0kb downstream 2.0kb downstream 3485 true Chr3: 8899154-8902638 Arabidopsis thaliana
AT3G24480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8899154-8901153 Arabidopsis thaliana
AT3G24480 5.0kb upstream 5.0kb upstream 6485 true Chr3: 8901154-8907638 Arabidopsis thaliana
AT3G24480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8902639-8907638 Arabidopsis thaliana
AT3G24480 5.0kb downstream 5.0kb downstream 6485 true Chr3: 8896154-8902638 Arabidopsis thaliana
AT3G24480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8896154-8901153 Arabidopsis thaliana
AT3G24480 10.0kb upstream 10.0kb upstream 11485 true Chr3: 8901154-8912638 Arabidopsis thaliana
AT3G24480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8902639-8912638 Arabidopsis thaliana
AT3G24480 10.0kb downstream 10.0kb downstream 11485 true Chr3: 8891154-8902638 Arabidopsis thaliana
AT3G24480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8891154-8901153 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378378 5261 Brassicaceae View MSA
123838219 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.29     High  
cufflinks 92.599     High  
cufflinks 48.144     High  
cufflinks 93.748     High  
cufflinks 40.553     High Low
cufflinks 135.322     High High

0 Strain