Gene : AT3G23900 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32343//PTHR32343:SF8 - FAMILY NOT NAMED // LD29830P Genomic Order:  2511
Name:  ? AT3G23900 Secondary Identifier:  ? PAC:19659039
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23900 0.5kb upstream 0.5kb upstream 4976 true Chr3: 8631584-8636559 Arabidopsis thaliana
AT3G23900 0.5kb upstream 0.5kb upstream 500 false Chr3: 8636060-8636559 Arabidopsis thaliana
AT3G23900 0.5kb downstream 0.5kb downstream 4976 true Chr3: 8631084-8636059 Arabidopsis thaliana
AT3G23900 0.5kb downstream 0.5kb downstream 500 false Chr3: 8631084-8631583 Arabidopsis thaliana
AT3G23900 1.0kb upstream 1.0kb upstream 5476 true Chr3: 8631584-8637059 Arabidopsis thaliana
AT3G23900 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8636060-8637059 Arabidopsis thaliana
AT3G23900 1.0kb downstream 1.0kb downstream 5476 true Chr3: 8630584-8636059 Arabidopsis thaliana
AT3G23900 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8630584-8631583 Arabidopsis thaliana
AT3G23900 2.0kb upstream 2.0kb upstream 6476 true Chr3: 8631584-8638059 Arabidopsis thaliana
AT3G23900 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8636060-8638059 Arabidopsis thaliana
AT3G23900 2.0kb downstream 2.0kb downstream 6476 true Chr3: 8629584-8636059 Arabidopsis thaliana
AT3G23900 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8629584-8631583 Arabidopsis thaliana
AT3G23900 5.0kb upstream 5.0kb upstream 9476 true Chr3: 8631584-8641059 Arabidopsis thaliana
AT3G23900 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8636060-8641059 Arabidopsis thaliana
AT3G23900 5.0kb downstream 5.0kb downstream 9476 true Chr3: 8626584-8636059 Arabidopsis thaliana
AT3G23900 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8626584-8631583 Arabidopsis thaliana
AT3G23900 10.0kb upstream 10.0kb upstream 14476 true Chr3: 8631584-8646059 Arabidopsis thaliana
AT3G23900 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8636060-8646059 Arabidopsis thaliana
AT3G23900 10.0kb downstream 10.0kb downstream 14476 true Chr3: 8621584-8636059 Arabidopsis thaliana
AT3G23900 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8621584-8631583 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364639 5261 Brassicaceae View MSA
123835433 5264 Brassicales-Malvales View MSA
124339993 5266 SBM View MSA
124240638 5268 Malvidae View MSA
124065309 5270 Rosid View MSA
123738211 5271 Pentapetalae View MSA
122787421 5272 Eudicot View MSA
122048285 5273 Angiosperm View MSA
121347519 5274 Embryophyte View MSA
123428748 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.245        
cufflinks 4.648        
cufflinks 4.128        
cufflinks 5.555       High
cufflinks 4.063        
cufflinks 4.61        

0 Strain