Gene : PKP-ALPHA A. thaliana TAIR10
Primary Identifier:  ? AT3G22960 Defline:  (1 of 1) PTHR11817//PTHR11817:SF14 - PYRUVATE KINASE // PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC
Genomic Order:  2401 Name:  ? AT3G22960
Secondary Identifier:  ? PAC:19659690
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22960 0.5kb upstream 0.5kb upstream 3251 true Chr3: 8138735-8141985 Arabidopsis thaliana
AT3G22960 0.5kb upstream 0.5kb upstream 500 false Chr3: 8138735-8139234 Arabidopsis thaliana
AT3G22960 0.5kb downstream 0.5kb downstream 3251 true Chr3: 8139235-8142485 Arabidopsis thaliana
AT3G22960 0.5kb downstream 0.5kb downstream 500 false Chr3: 8141986-8142485 Arabidopsis thaliana
AT3G22960 1.0kb upstream 1.0kb upstream 3751 true Chr3: 8138235-8141985 Arabidopsis thaliana
AT3G22960 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8138235-8139234 Arabidopsis thaliana
AT3G22960 1.0kb downstream 1.0kb downstream 3751 true Chr3: 8139235-8142985 Arabidopsis thaliana
AT3G22960 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8141986-8142985 Arabidopsis thaliana
AT3G22960 2.0kb upstream 2.0kb upstream 4751 true Chr3: 8137235-8141985 Arabidopsis thaliana
AT3G22960 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8137235-8139234 Arabidopsis thaliana
AT3G22960 2.0kb downstream 2.0kb downstream 4751 true Chr3: 8139235-8143985 Arabidopsis thaliana
AT3G22960 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8141986-8143985 Arabidopsis thaliana
AT3G22960 5.0kb upstream 5.0kb upstream 7751 true Chr3: 8134235-8141985 Arabidopsis thaliana
AT3G22960 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8134235-8139234 Arabidopsis thaliana
AT3G22960 5.0kb downstream 5.0kb downstream 7751 true Chr3: 8139235-8146985 Arabidopsis thaliana
AT3G22960 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8141986-8146985 Arabidopsis thaliana
AT3G22960 10.0kb upstream 10.0kb upstream 12751 true Chr3: 8129235-8141985 Arabidopsis thaliana
AT3G22960 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8129235-8139234 Arabidopsis thaliana
AT3G22960 10.0kb downstream 10.0kb downstream 12751 true Chr3: 8139235-8151985 Arabidopsis thaliana
AT3G22960 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8141986-8151985 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361118 5261 Brassicaceae View MSA
123830504 5264 Brassicales-Malvales View MSA
124343810 5266 SBM View MSA
124241704 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.06     High  
cufflinks 97.709     High  
cufflinks 126.203     High High
cufflinks 97.451     High  
cufflinks 102.775     High  
cufflinks 101.927     High  

0 Strain