Gene : AT3G22440 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  2347
Name:  ? AT3G22440 Secondary Identifier:  ? PAC:19664264
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22440 0.5kb upstream 0.5kb upstream 2947 true Chr3: 7959254-7962200 Arabidopsis thaliana
AT3G22440 0.5kb upstream 0.5kb upstream 500 false Chr3: 7959254-7959753 Arabidopsis thaliana
AT3G22440 0.5kb downstream 0.5kb downstream 2947 true Chr3: 7959754-7962700 Arabidopsis thaliana
AT3G22440 0.5kb downstream 0.5kb downstream 500 false Chr3: 7962201-7962700 Arabidopsis thaliana
AT3G22440 1.0kb upstream 1.0kb upstream 3447 true Chr3: 7958754-7962200 Arabidopsis thaliana
AT3G22440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7958754-7959753 Arabidopsis thaliana
AT3G22440 1.0kb downstream 1.0kb downstream 3447 true Chr3: 7959754-7963200 Arabidopsis thaliana
AT3G22440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7962201-7963200 Arabidopsis thaliana
AT3G22440 2.0kb upstream 2.0kb upstream 4447 true Chr3: 7957754-7962200 Arabidopsis thaliana
AT3G22440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7957754-7959753 Arabidopsis thaliana
AT3G22440 2.0kb downstream 2.0kb downstream 4447 true Chr3: 7959754-7964200 Arabidopsis thaliana
AT3G22440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7962201-7964200 Arabidopsis thaliana
AT3G22440 5.0kb upstream 5.0kb upstream 7447 true Chr3: 7954754-7962200 Arabidopsis thaliana
AT3G22440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7954754-7959753 Arabidopsis thaliana
AT3G22440 5.0kb downstream 5.0kb downstream 7447 true Chr3: 7959754-7967200 Arabidopsis thaliana
AT3G22440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7962201-7967200 Arabidopsis thaliana
AT3G22440 10.0kb upstream 10.0kb upstream 12447 true Chr3: 7949754-7962200 Arabidopsis thaliana
AT3G22440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7949754-7959753 Arabidopsis thaliana
AT3G22440 10.0kb downstream 10.0kb downstream 12447 true Chr3: 7959754-7972200 Arabidopsis thaliana
AT3G22440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7962201-7972200 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376359 5261 Brassicaceae View MSA
123833168 5264 Brassicales-Malvales View MSA
124339127 5266 SBM View MSA
124239483 5268 Malvidae View MSA
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.245     High  
cufflinks 278.395     High High
cufflinks 106.4     High Low
cufflinks 248.389     High  
cufflinks 123.495     High  
cufflinks 194.543     High  

0 Strain