Gene : AT3G22104 A. thaliana TAIR10
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  2308
Name:  ? AT3G22104 Secondary Identifier:  ? PAC:19663446
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22104 0.5kb upstream 0.5kb upstream 3505 true Chr3: 7788876-7792380 Arabidopsis thaliana
AT3G22104 0.5kb upstream 0.5kb upstream 500 false Chr3: 7788876-7789375 Arabidopsis thaliana
AT3G22104 0.5kb downstream 0.5kb downstream 3505 true Chr3: 7789376-7792880 Arabidopsis thaliana
AT3G22104 0.5kb downstream 0.5kb downstream 500 false Chr3: 7792381-7792880 Arabidopsis thaliana
AT3G22104 1.0kb upstream 1.0kb upstream 4005 true Chr3: 7788376-7792380 Arabidopsis thaliana
AT3G22104 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7788376-7789375 Arabidopsis thaliana
AT3G22104 1.0kb downstream 1.0kb downstream 4005 true Chr3: 7789376-7793380 Arabidopsis thaliana
AT3G22104 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7792381-7793380 Arabidopsis thaliana
AT3G22104 2.0kb upstream 2.0kb upstream 5005 true Chr3: 7787376-7792380 Arabidopsis thaliana
AT3G22104 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7787376-7789375 Arabidopsis thaliana
AT3G22104 2.0kb downstream 2.0kb downstream 5005 true Chr3: 7789376-7794380 Arabidopsis thaliana
AT3G22104 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7792381-7794380 Arabidopsis thaliana
AT3G22104 5.0kb upstream 5.0kb upstream 8005 true Chr3: 7784376-7792380 Arabidopsis thaliana
AT3G22104 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7784376-7789375 Arabidopsis thaliana
AT3G22104 5.0kb downstream 5.0kb downstream 8005 true Chr3: 7789376-7797380 Arabidopsis thaliana
AT3G22104 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7792381-7797380 Arabidopsis thaliana
AT3G22104 10.0kb upstream 10.0kb upstream 13005 true Chr3: 7779376-7792380 Arabidopsis thaliana
AT3G22104 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7779376-7789375 Arabidopsis thaliana
AT3G22104 10.0kb downstream 10.0kb downstream 13005 true Chr3: 7789376-7802380 Arabidopsis thaliana
AT3G22104 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7792381-7802380 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378272 5261 Brassicaceae View MSA
123836731 5264 Brassicales-Malvales View MSA
124346744 5266 SBM View MSA
124246387 5268 Malvidae View MSA
124069355 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.083       High
cufflinks 4.562        
cufflinks 6.162        
cufflinks 4.743        
cufflinks 4.852        
cufflinks 4.743        

0 Strain