Gene : AT3G45430 A. thaliana TAIR10
Defline:  (1 of 21) PTHR27007:SF63 - L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE I.1-RELATED Genomic Order:  3522
Name:  ? AT3G45430 Secondary Identifier:  ? PAC:19663529
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45430 0.5kb upstream 0.5kb upstream 2525 true Chr3: 16660759-16663283 Arabidopsis thaliana
AT3G45430 0.5kb upstream 0.5kb upstream 500 false Chr3: 16662784-16663283 Arabidopsis thaliana
AT3G45430 0.5kb downstream 0.5kb downstream 2525 true Chr3: 16660259-16662783 Arabidopsis thaliana
AT3G45430 0.5kb downstream 0.5kb downstream 500 false Chr3: 16660259-16660758 Arabidopsis thaliana
AT3G45430 1.0kb upstream 1.0kb upstream 3025 true Chr3: 16660759-16663783 Arabidopsis thaliana
AT3G45430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16662784-16663783 Arabidopsis thaliana
AT3G45430 1.0kb downstream 1.0kb downstream 3025 true Chr3: 16659759-16662783 Arabidopsis thaliana
AT3G45430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16659759-16660758 Arabidopsis thaliana
AT3G45430 2.0kb upstream 2.0kb upstream 4025 true Chr3: 16660759-16664783 Arabidopsis thaliana
AT3G45430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16662784-16664783 Arabidopsis thaliana
AT3G45430 2.0kb downstream 2.0kb downstream 4025 true Chr3: 16658759-16662783 Arabidopsis thaliana
AT3G45430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16658759-16660758 Arabidopsis thaliana
AT3G45430 5.0kb upstream 5.0kb upstream 7025 true Chr3: 16660759-16667783 Arabidopsis thaliana
AT3G45430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16662784-16667783 Arabidopsis thaliana
AT3G45430 5.0kb downstream 5.0kb downstream 7025 true Chr3: 16655759-16662783 Arabidopsis thaliana
AT3G45430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16655759-16660758 Arabidopsis thaliana
AT3G45430 10.0kb upstream 10.0kb upstream 12025 true Chr3: 16660759-16672783 Arabidopsis thaliana
AT3G45430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16662784-16672783 Arabidopsis thaliana
AT3G45430 10.0kb downstream 10.0kb downstream 12025 true Chr3: 16650759-16662783 Arabidopsis thaliana
AT3G45430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16650759-16660758 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378216 5261 Brassicaceae View MSA
123801790 5264 Brassicales-Malvales View MSA
124299051 5266 SBM View MSA
124252554 5268 Malvidae View MSA
124071710 5270 Rosid View MSA
123746397 5271 Pentapetalae View MSA
122771896 5272 Eudicot View MSA
122049329 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.105        
cufflinks 3.396        
cufflinks 1.218        
cufflinks 3.117        
cufflinks 0.353       Low
cufflinks 3.728        

0 Strain