Gene : AT3G45190 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  3498
Name:  ? AT3G45190 Secondary Identifier:  ? PAC:19659778
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45190 0.5kb upstream 0.5kb upstream 7106 true Chr3: 16541673-16548778 Arabidopsis thaliana
AT3G45190 0.5kb upstream 0.5kb upstream 500 false Chr3: 16548279-16548778 Arabidopsis thaliana
AT3G45190 0.5kb downstream 0.5kb downstream 7106 true Chr3: 16541173-16548278 Arabidopsis thaliana
AT3G45190 0.5kb downstream 0.5kb downstream 500 false Chr3: 16541173-16541672 Arabidopsis thaliana
AT3G45190 1.0kb upstream 1.0kb upstream 7606 true Chr3: 16541673-16549278 Arabidopsis thaliana
AT3G45190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16548279-16549278 Arabidopsis thaliana
AT3G45190 1.0kb downstream 1.0kb downstream 7606 true Chr3: 16540673-16548278 Arabidopsis thaliana
AT3G45190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16540673-16541672 Arabidopsis thaliana
AT3G45190 2.0kb upstream 2.0kb upstream 8606 true Chr3: 16541673-16550278 Arabidopsis thaliana
AT3G45190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16548279-16550278 Arabidopsis thaliana
AT3G45190 2.0kb downstream 2.0kb downstream 8606 true Chr3: 16539673-16548278 Arabidopsis thaliana
AT3G45190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16539673-16541672 Arabidopsis thaliana
AT3G45190 5.0kb upstream 5.0kb upstream 11606 true Chr3: 16541673-16553278 Arabidopsis thaliana
AT3G45190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16548279-16553278 Arabidopsis thaliana
AT3G45190 5.0kb downstream 5.0kb downstream 11606 true Chr3: 16536673-16548278 Arabidopsis thaliana
AT3G45190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16536673-16541672 Arabidopsis thaliana
AT3G45190 10.0kb upstream 10.0kb upstream 16606 true Chr3: 16541673-16558278 Arabidopsis thaliana
AT3G45190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16548279-16558278 Arabidopsis thaliana
AT3G45190 10.0kb downstream 10.0kb downstream 16606 true Chr3: 16531673-16548278 Arabidopsis thaliana
AT3G45190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16531673-16541672 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372167 5261 Brassicaceae View MSA
123800311 5264 Brassicales-Malvales View MSA
124297738 5266 SBM View MSA
124149552 5268 Malvidae View MSA
123875339 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.569        
cufflinks 15.664        
cufflinks 8.989       Low
cufflinks 15.986        
cufflinks 9.155       Low
cufflinks 15.92        

0 Strain