Gene : AT3G45020 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  3481
Name:  ? AT3G45020 Secondary Identifier:  ? PAC:19662337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G45020 0.5kb upstream 0.5kb upstream 1693 true Chr3: 16468961-16470653 Arabidopsis thaliana
AT3G45020 0.5kb upstream 0.5kb upstream 500 false Chr3: 16470154-16470653 Arabidopsis thaliana
AT3G45020 0.5kb downstream 0.5kb downstream 1693 true Chr3: 16468461-16470153 Arabidopsis thaliana
AT3G45020 0.5kb downstream 0.5kb downstream 500 false Chr3: 16468461-16468960 Arabidopsis thaliana
AT3G45020 1.0kb upstream 1.0kb upstream 2193 true Chr3: 16468961-16471153 Arabidopsis thaliana
AT3G45020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16470154-16471153 Arabidopsis thaliana
AT3G45020 1.0kb downstream 1.0kb downstream 2193 true Chr3: 16467961-16470153 Arabidopsis thaliana
AT3G45020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16467961-16468960 Arabidopsis thaliana
AT3G45020 2.0kb upstream 2.0kb upstream 3193 true Chr3: 16468961-16472153 Arabidopsis thaliana
AT3G45020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16470154-16472153 Arabidopsis thaliana
AT3G45020 2.0kb downstream 2.0kb downstream 3193 true Chr3: 16466961-16470153 Arabidopsis thaliana
AT3G45020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16466961-16468960 Arabidopsis thaliana
AT3G45020 5.0kb upstream 5.0kb upstream 6193 true Chr3: 16468961-16475153 Arabidopsis thaliana
AT3G45020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16470154-16475153 Arabidopsis thaliana
AT3G45020 5.0kb downstream 5.0kb downstream 6193 true Chr3: 16463961-16470153 Arabidopsis thaliana
AT3G45020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16463961-16468960 Arabidopsis thaliana
AT3G45020 10.0kb upstream 10.0kb upstream 11193 true Chr3: 16468961-16480153 Arabidopsis thaliana
AT3G45020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16470154-16480153 Arabidopsis thaliana
AT3G45020 10.0kb downstream 10.0kb downstream 11193 true Chr3: 16458961-16470153 Arabidopsis thaliana
AT3G45020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16458961-16468960 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361957 5261 Brassicaceae View MSA
123831232 5264 Brassicales-Malvales View MSA
124341176 5266 SBM View MSA
124243313 5268 Malvidae View MSA
124065867 5270 Rosid View MSA
123736838 5271 Pentapetalae View MSA
122788352 5272 Eudicot View MSA
122047564 5273 Angiosperm View MSA
121310762 5274 Embryophyte View MSA
123348169 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.154        
cufflinks 3.443        
cufflinks 2.955        
cufflinks 3.679        
cufflinks 2.349       Low
cufflinks 3.646        

0 Strain