Gene : AFP3 A. thaliana TAIR10
Primary Identifier:  ? AT3G29575 Defline:  (1 of 1) PTHR31413//PTHR31413:SF0 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP3
Genomic Order:  3131 Name:  ? AT3G29575
Secondary Identifier:  ? PAC:19664379
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G29575 0.5kb upstream 0.5kb upstream 2291 true Chr3: 11382214-11384504 Arabidopsis thaliana
AT3G29575 0.5kb upstream 0.5kb upstream 500 false Chr3: 11384005-11384504 Arabidopsis thaliana
AT3G29575 0.5kb downstream 0.5kb downstream 2291 true Chr3: 11381714-11384004 Arabidopsis thaliana
AT3G29575 0.5kb downstream 0.5kb downstream 500 false Chr3: 11381714-11382213 Arabidopsis thaliana
AT3G29575 1.0kb upstream 1.0kb upstream 2791 true Chr3: 11382214-11385004 Arabidopsis thaliana
AT3G29575 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11384005-11385004 Arabidopsis thaliana
AT3G29575 1.0kb downstream 1.0kb downstream 2791 true Chr3: 11381214-11384004 Arabidopsis thaliana
AT3G29575 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11381214-11382213 Arabidopsis thaliana
AT3G29575 2.0kb upstream 2.0kb upstream 3791 true Chr3: 11382214-11386004 Arabidopsis thaliana
AT3G29575 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11384005-11386004 Arabidopsis thaliana
AT3G29575 2.0kb downstream 2.0kb downstream 3791 true Chr3: 11380214-11384004 Arabidopsis thaliana
AT3G29575 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11380214-11382213 Arabidopsis thaliana
AT3G29575 5.0kb upstream 5.0kb upstream 6791 true Chr3: 11382214-11389004 Arabidopsis thaliana
AT3G29575 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11384005-11389004 Arabidopsis thaliana
AT3G29575 5.0kb downstream 5.0kb downstream 6791 true Chr3: 11377214-11384004 Arabidopsis thaliana
AT3G29575 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11377214-11382213 Arabidopsis thaliana
AT3G29575 10.0kb upstream 10.0kb upstream 11791 true Chr3: 11382214-11394004 Arabidopsis thaliana
AT3G29575 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11384005-11394004 Arabidopsis thaliana
AT3G29575 10.0kb downstream 10.0kb downstream 11791 true Chr3: 11372214-11384004 Arabidopsis thaliana
AT3G29575 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11372214-11382213 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362477 5261 Brassicaceae View MSA
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.88        
cufflinks 2.738        
cufflinks 2.364       Low
cufflinks 5.72       High
cufflinks 4.332        
cufflinks 3.367        

0 Strain