Gene : AT3G27350 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31358:SF6 - F3I6.9 PROTEIN Genomic Order:  2893
Name:  ? AT3G27350 Secondary Identifier:  ? PAC:19664538
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27350 0.5kb upstream 0.5kb upstream 2834 true Chr3: 10125159-10127992 Arabidopsis thaliana
AT3G27350 0.5kb upstream 0.5kb upstream 500 false Chr3: 10125159-10125658 Arabidopsis thaliana
AT3G27350 0.5kb downstream 0.5kb downstream 2834 true Chr3: 10125659-10128492 Arabidopsis thaliana
AT3G27350 0.5kb downstream 0.5kb downstream 500 false Chr3: 10127993-10128492 Arabidopsis thaliana
AT3G27350 1.0kb upstream 1.0kb upstream 3334 true Chr3: 10124659-10127992 Arabidopsis thaliana
AT3G27350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10124659-10125658 Arabidopsis thaliana
AT3G27350 1.0kb downstream 1.0kb downstream 3334 true Chr3: 10125659-10128992 Arabidopsis thaliana
AT3G27350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10127993-10128992 Arabidopsis thaliana
AT3G27350 2.0kb upstream 2.0kb upstream 4334 true Chr3: 10123659-10127992 Arabidopsis thaliana
AT3G27350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10123659-10125658 Arabidopsis thaliana
AT3G27350 2.0kb downstream 2.0kb downstream 4334 true Chr3: 10125659-10129992 Arabidopsis thaliana
AT3G27350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10127993-10129992 Arabidopsis thaliana
AT3G27350 5.0kb upstream 5.0kb upstream 7334 true Chr3: 10120659-10127992 Arabidopsis thaliana
AT3G27350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10120659-10125658 Arabidopsis thaliana
AT3G27350 5.0kb downstream 5.0kb downstream 7334 true Chr3: 10125659-10132992 Arabidopsis thaliana
AT3G27350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10127993-10132992 Arabidopsis thaliana
AT3G27350 10.0kb upstream 10.0kb upstream 12334 true Chr3: 10115659-10127992 Arabidopsis thaliana
AT3G27350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10115659-10125658 Arabidopsis thaliana
AT3G27350 10.0kb downstream 10.0kb downstream 12334 true Chr3: 10125659-10137992 Arabidopsis thaliana
AT3G27350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10127993-10137992 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367476 5261 Brassicaceae View MSA
123799364 5264 Brassicales-Malvales View MSA
124296891 5266 SBM View MSA
124148924 5268 Malvidae View MSA
124072865 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.374       Low
cufflinks 3.524        
cufflinks 1.586        
cufflinks 4.571       High
cufflinks 1.514        
cufflinks 3.908        

0 Strain