Gene : AT3G16460 A. thaliana TAIR10
Defline:  (1 of 39) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED Genomic Order:  1689
Name:  ? AT3G16460 Secondary Identifier:  ? PAC:19664023
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16460 0.5kb upstream 0.5kb upstream 3636 true Chr3: 5592082-5595717 Arabidopsis thaliana
AT3G16460 0.5kb upstream 0.5kb upstream 500 false Chr3: 5592082-5592581 Arabidopsis thaliana
AT3G16460 0.5kb downstream 0.5kb downstream 3636 true Chr3: 5592582-5596217 Arabidopsis thaliana
AT3G16460 0.5kb downstream 0.5kb downstream 500 false Chr3: 5595718-5596217 Arabidopsis thaliana
AT3G16460 1.0kb upstream 1.0kb upstream 4136 true Chr3: 5591582-5595717 Arabidopsis thaliana
AT3G16460 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5591582-5592581 Arabidopsis thaliana
AT3G16460 1.0kb downstream 1.0kb downstream 4136 true Chr3: 5592582-5596717 Arabidopsis thaliana
AT3G16460 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5595718-5596717 Arabidopsis thaliana
AT3G16460 2.0kb upstream 2.0kb upstream 5136 true Chr3: 5590582-5595717 Arabidopsis thaliana
AT3G16460 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5590582-5592581 Arabidopsis thaliana
AT3G16460 2.0kb downstream 2.0kb downstream 5136 true Chr3: 5592582-5597717 Arabidopsis thaliana
AT3G16460 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5595718-5597717 Arabidopsis thaliana
AT3G16460 5.0kb upstream 5.0kb upstream 8136 true Chr3: 5587582-5595717 Arabidopsis thaliana
AT3G16460 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5587582-5592581 Arabidopsis thaliana
AT3G16460 5.0kb downstream 5.0kb downstream 8136 true Chr3: 5592582-5600717 Arabidopsis thaliana
AT3G16460 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5595718-5600717 Arabidopsis thaliana
AT3G16460 10.0kb upstream 10.0kb upstream 13136 true Chr3: 5582582-5595717 Arabidopsis thaliana
AT3G16460 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5582582-5592581 Arabidopsis thaliana
AT3G16460 10.0kb downstream 10.0kb downstream 13136 true Chr3: 5592582-5605717 Arabidopsis thaliana
AT3G16460 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5595718-5605717 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360575 5261 Brassicaceae View MSA
123797981 5264 Brassicales-Malvales View MSA
124295672 5266 SBM View MSA
124148048 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.933        
cufflinks 92.799     High  
cufflinks 2.694        
cufflinks 147.851     High High
cufflinks 2.889        
cufflinks 120.406     High  

0 Strain