Gene : MLP-300B A. thaliana TAIR10
Primary Identifier:  ? AT3G16440 Defline:  (1 of 39) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED
Genomic Order:  1687 Name:  ? AT3G16440
Secondary Identifier:  ? PAC:19664518
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16440 0.5kb upstream 0.5kb upstream 2307 true Chr3: 5585444-5587750 Arabidopsis thaliana
AT3G16440 0.5kb upstream 0.5kb upstream 500 false Chr3: 5585444-5585943 Arabidopsis thaliana
AT3G16440 0.5kb downstream 0.5kb downstream 2307 true Chr3: 5585944-5588250 Arabidopsis thaliana
AT3G16440 0.5kb downstream 0.5kb downstream 500 false Chr3: 5587751-5588250 Arabidopsis thaliana
AT3G16440 1.0kb upstream 1.0kb upstream 2807 true Chr3: 5584944-5587750 Arabidopsis thaliana
AT3G16440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5584944-5585943 Arabidopsis thaliana
AT3G16440 1.0kb downstream 1.0kb downstream 2807 true Chr3: 5585944-5588750 Arabidopsis thaliana
AT3G16440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5587751-5588750 Arabidopsis thaliana
AT3G16440 2.0kb upstream 2.0kb upstream 3807 true Chr3: 5583944-5587750 Arabidopsis thaliana
AT3G16440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5583944-5585943 Arabidopsis thaliana
AT3G16440 2.0kb downstream 2.0kb downstream 3807 true Chr3: 5585944-5589750 Arabidopsis thaliana
AT3G16440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5587751-5589750 Arabidopsis thaliana
AT3G16440 5.0kb upstream 5.0kb upstream 6807 true Chr3: 5580944-5587750 Arabidopsis thaliana
AT3G16440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5580944-5585943 Arabidopsis thaliana
AT3G16440 5.0kb downstream 5.0kb downstream 6807 true Chr3: 5585944-5592750 Arabidopsis thaliana
AT3G16440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5587751-5592750 Arabidopsis thaliana
AT3G16440 10.0kb upstream 10.0kb upstream 11807 true Chr3: 5575944-5587750 Arabidopsis thaliana
AT3G16440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5575944-5585943 Arabidopsis thaliana
AT3G16440 10.0kb downstream 10.0kb downstream 11807 true Chr3: 5585944-5597750 Arabidopsis thaliana
AT3G16440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5587751-5597750 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343452 5261 Brassicaceae View MSA
123783647 5264 Brassicales-Malvales View MSA
124281868 5266 SBM View MSA
124136551 5268 Malvidae View MSA
123864395 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 2.59        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.786        
cufflinks 0.009     Low Low
cufflinks 6.948        

0 Strain