Gene : AT3G15650 A. thaliana TAIR10
Defline:  (1 of 2) K06130 - lysophospholipase II (LYPLA2) Genomic Order:  1604
Name:  ? AT3G15650 Secondary Identifier:  ? PAC:19663749
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7409 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15650 0.5kb upstream 0.5kb upstream 2551 true Chr3: 5305418-5307968 Arabidopsis thaliana
AT3G15650 0.5kb upstream 0.5kb upstream 500 false Chr3: 5305418-5305917 Arabidopsis thaliana
AT3G15650 0.5kb downstream 0.5kb downstream 2551 true Chr3: 5305918-5308468 Arabidopsis thaliana
AT3G15650 0.5kb downstream 0.5kb downstream 500 false Chr3: 5307969-5308468 Arabidopsis thaliana
AT3G15650 1.0kb upstream 1.0kb upstream 3051 true Chr3: 5304918-5307968 Arabidopsis thaliana
AT3G15650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5304918-5305917 Arabidopsis thaliana
AT3G15650 1.0kb downstream 1.0kb downstream 3051 true Chr3: 5305918-5308968 Arabidopsis thaliana
AT3G15650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5307969-5308968 Arabidopsis thaliana
AT3G15650 2.0kb upstream 2.0kb upstream 4051 true Chr3: 5303918-5307968 Arabidopsis thaliana
AT3G15650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5303918-5305917 Arabidopsis thaliana
AT3G15650 2.0kb downstream 2.0kb downstream 4051 true Chr3: 5305918-5309968 Arabidopsis thaliana
AT3G15650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5307969-5309968 Arabidopsis thaliana
AT3G15650 5.0kb upstream 5.0kb upstream 7051 true Chr3: 5300918-5307968 Arabidopsis thaliana
AT3G15650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5300918-5305917 Arabidopsis thaliana
AT3G15650 5.0kb downstream 5.0kb downstream 7051 true Chr3: 5305918-5312968 Arabidopsis thaliana
AT3G15650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5307969-5312968 Arabidopsis thaliana
AT3G15650 10.0kb upstream 10.0kb upstream 12051 true Chr3: 5295918-5307968 Arabidopsis thaliana
AT3G15650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5295918-5305917 Arabidopsis thaliana
AT3G15650 10.0kb downstream 10.0kb downstream 12051 true Chr3: 5305918-5317968 Arabidopsis thaliana
AT3G15650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5307969-5317968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361094 5261 Brassicaceae View MSA
123836615 5264 Brassicales-Malvales View MSA
124338971 5266 SBM View MSA
124245146 5268 Malvidae View MSA
124070848 5270 Rosid View MSA
123747021 5271 Pentapetalae View MSA
122795492 5272 Eudicot View MSA
122046747 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.37        
cufflinks 8.25        
cufflinks 0.354        
cufflinks 5.333        
cufflinks 0.245       Low
cufflinks 15.993       High

0 Strain