Gene : TOC120 A. thaliana TAIR10
Primary Identifier:  ? AT3G16620 Defline:  (1 of 2) PTHR10903:SF47 - TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-RELATED
Genomic Order:  1707 Name:  ? AT3G16620
Secondary Identifier:  ? PAC:19664532
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16620 0.5kb upstream 0.5kb upstream 4147 true Chr3: 5658317-5662463 Arabidopsis thaliana
AT3G16620 0.5kb upstream 0.5kb upstream 500 false Chr3: 5661964-5662463 Arabidopsis thaliana
AT3G16620 0.5kb downstream 0.5kb downstream 4147 true Chr3: 5657817-5661963 Arabidopsis thaliana
AT3G16620 0.5kb downstream 0.5kb downstream 500 false Chr3: 5657817-5658316 Arabidopsis thaliana
AT3G16620 1.0kb upstream 1.0kb upstream 4647 true Chr3: 5658317-5662963 Arabidopsis thaliana
AT3G16620 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5661964-5662963 Arabidopsis thaliana
AT3G16620 1.0kb downstream 1.0kb downstream 4647 true Chr3: 5657317-5661963 Arabidopsis thaliana
AT3G16620 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5657317-5658316 Arabidopsis thaliana
AT3G16620 2.0kb upstream 2.0kb upstream 5647 true Chr3: 5658317-5663963 Arabidopsis thaliana
AT3G16620 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5661964-5663963 Arabidopsis thaliana
AT3G16620 2.0kb downstream 2.0kb downstream 5647 true Chr3: 5656317-5661963 Arabidopsis thaliana
AT3G16620 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5656317-5658316 Arabidopsis thaliana
AT3G16620 5.0kb upstream 5.0kb upstream 8647 true Chr3: 5658317-5666963 Arabidopsis thaliana
AT3G16620 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5661964-5666963 Arabidopsis thaliana
AT3G16620 5.0kb downstream 5.0kb downstream 8647 true Chr3: 5653317-5661963 Arabidopsis thaliana
AT3G16620 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5653317-5658316 Arabidopsis thaliana
AT3G16620 10.0kb upstream 10.0kb upstream 13647 true Chr3: 5658317-5671963 Arabidopsis thaliana
AT3G16620 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5661964-5671963 Arabidopsis thaliana
AT3G16620 10.0kb downstream 10.0kb downstream 13647 true Chr3: 5648317-5661963 Arabidopsis thaliana
AT3G16620 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5648317-5658316 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379385 5261 Brassicaceae View MSA
123836939 5264 Brassicales-Malvales View MSA
124350129 5266 SBM View MSA
124247644 5268 Malvidae View MSA
124067138 5270 Rosid View MSA
123750578 5271 Pentapetalae View MSA
122788806 5272 Eudicot View MSA
122047834 5273 Angiosperm View MSA
121348956 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06        
cufflinks 10.605        
cufflinks 3.063        
cufflinks 10.749        
cufflinks 2.645       Low
cufflinks 11.738        

0 Strain