Gene : IAA19 A. thaliana TAIR10
Primary Identifier:  ? AT3G15540 Defline:  (1 of 3) PTHR31734:SF12 - AUXIN-RESPONSIVE PROTEIN IAA19-RELATED
Genomic Order:  1591 Name:  ? AT3G15540
Secondary Identifier:  ? PAC:19661266
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15540 0.5kb upstream 0.5kb upstream 2155 true Chr3: 5263524-5265678 Arabidopsis thaliana
AT3G15540 0.5kb upstream 0.5kb upstream 500 false Chr3: 5263524-5264023 Arabidopsis thaliana
AT3G15540 0.5kb downstream 0.5kb downstream 2155 true Chr3: 5264024-5266178 Arabidopsis thaliana
AT3G15540 0.5kb downstream 0.5kb downstream 500 false Chr3: 5265679-5266178 Arabidopsis thaliana
AT3G15540 1.0kb upstream 1.0kb upstream 2655 true Chr3: 5263024-5265678 Arabidopsis thaliana
AT3G15540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5263024-5264023 Arabidopsis thaliana
AT3G15540 1.0kb downstream 1.0kb downstream 2655 true Chr3: 5264024-5266678 Arabidopsis thaliana
AT3G15540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5265679-5266678 Arabidopsis thaliana
AT3G15540 2.0kb upstream 2.0kb upstream 3655 true Chr3: 5262024-5265678 Arabidopsis thaliana
AT3G15540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5262024-5264023 Arabidopsis thaliana
AT3G15540 2.0kb downstream 2.0kb downstream 3655 true Chr3: 5264024-5267678 Arabidopsis thaliana
AT3G15540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5265679-5267678 Arabidopsis thaliana
AT3G15540 5.0kb upstream 5.0kb upstream 6655 true Chr3: 5259024-5265678 Arabidopsis thaliana
AT3G15540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5259024-5264023 Arabidopsis thaliana
AT3G15540 5.0kb downstream 5.0kb downstream 6655 true Chr3: 5264024-5270678 Arabidopsis thaliana
AT3G15540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5265679-5270678 Arabidopsis thaliana
AT3G15540 10.0kb upstream 10.0kb upstream 11655 true Chr3: 5254024-5265678 Arabidopsis thaliana
AT3G15540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5254024-5264023 Arabidopsis thaliana
AT3G15540 10.0kb downstream 10.0kb downstream 11655 true Chr3: 5264024-5275678 Arabidopsis thaliana
AT3G15540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5265679-5275678 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370997 5261 Brassicaceae View MSA
123828634 5264 Brassicales-Malvales View MSA
124350777 5266 SBM View MSA
124243399 5268 Malvidae View MSA
124060642 5270 Rosid View MSA
123747255 5271 Pentapetalae View MSA
122788195 5272 Eudicot View MSA
122050292 5273 Angiosperm View MSA
121311842 5274 Embryophyte View MSA
123349083 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.955        
cufflinks 7.562        
cufflinks 2.226        
cufflinks 6.061        
cufflinks 1.349       Low
cufflinks 11.575       High

0 Strain