Gene : AT3G15080 A. thaliana TAIR10
Defline:  (1 of 1) K18327 - RNA exonuclease 4 [EC:3.1.-.-] (REXO4, REX4) Genomic Order:  1534
Name:  ? AT3G15080 Secondary Identifier:  ? PAC:19659906
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15080 0.5kb upstream 0.5kb upstream 2809 true Chr3: 5073716-5076524 Arabidopsis thaliana
AT3G15080 0.5kb upstream 0.5kb upstream 500 false Chr3: 5073716-5074215 Arabidopsis thaliana
AT3G15080 0.5kb downstream 0.5kb downstream 2809 true Chr3: 5074216-5077024 Arabidopsis thaliana
AT3G15080 0.5kb downstream 0.5kb downstream 500 false Chr3: 5076525-5077024 Arabidopsis thaliana
AT3G15080 1.0kb upstream 1.0kb upstream 3309 true Chr3: 5073216-5076524 Arabidopsis thaliana
AT3G15080 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5073216-5074215 Arabidopsis thaliana
AT3G15080 1.0kb downstream 1.0kb downstream 3309 true Chr3: 5074216-5077524 Arabidopsis thaliana
AT3G15080 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5076525-5077524 Arabidopsis thaliana
AT3G15080 2.0kb upstream 2.0kb upstream 4309 true Chr3: 5072216-5076524 Arabidopsis thaliana
AT3G15080 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5072216-5074215 Arabidopsis thaliana
AT3G15080 2.0kb downstream 2.0kb downstream 4309 true Chr3: 5074216-5078524 Arabidopsis thaliana
AT3G15080 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5076525-5078524 Arabidopsis thaliana
AT3G15080 5.0kb upstream 5.0kb upstream 7309 true Chr3: 5069216-5076524 Arabidopsis thaliana
AT3G15080 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5069216-5074215 Arabidopsis thaliana
AT3G15080 5.0kb downstream 5.0kb downstream 7309 true Chr3: 5074216-5081524 Arabidopsis thaliana
AT3G15080 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5076525-5081524 Arabidopsis thaliana
AT3G15080 10.0kb upstream 10.0kb upstream 12309 true Chr3: 5064216-5076524 Arabidopsis thaliana
AT3G15080 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5064216-5074215 Arabidopsis thaliana
AT3G15080 10.0kb downstream 10.0kb downstream 12309 true Chr3: 5074216-5086524 Arabidopsis thaliana
AT3G15080 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5076525-5086524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364352 5261 Brassicaceae View MSA
123831432 5264 Brassicales-Malvales View MSA
124338375 5266 SBM View MSA
124242495 5268 Malvidae View MSA
124068664 5270 Rosid View MSA
123737252 5271 Pentapetalae View MSA
122792858 5272 Eudicot View MSA
122042636 5273 Angiosperm View MSA
121346020 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.541        
cufflinks 5.275        
cufflinks 2.605        
cufflinks 4.806        
cufflinks 2.223       Low
cufflinks 5.802       High

0 Strain