Gene : HON4 A. thaliana TAIR10
Primary Identifier:  ? AT3G18035 Defline:  (1 of 2) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 // SUBFAMILY NOT NAMED
Genomic Order:  1860 Name:  ? AT3G18035
Secondary Identifier:  ? PAC:19659135
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18035 0.5kb upstream 0.5kb upstream 3135 true Chr3: 6169090-6172224 Arabidopsis thaliana
AT3G18035 0.5kb upstream 0.5kb upstream 500 false Chr3: 6171725-6172224 Arabidopsis thaliana
AT3G18035 0.5kb downstream 0.5kb downstream 3135 true Chr3: 6168590-6171724 Arabidopsis thaliana
AT3G18035 0.5kb downstream 0.5kb downstream 500 false Chr3: 6168590-6169089 Arabidopsis thaliana
AT3G18035 1.0kb upstream 1.0kb upstream 3635 true Chr3: 6169090-6172724 Arabidopsis thaliana
AT3G18035 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6171725-6172724 Arabidopsis thaliana
AT3G18035 1.0kb downstream 1.0kb downstream 3635 true Chr3: 6168090-6171724 Arabidopsis thaliana
AT3G18035 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6168090-6169089 Arabidopsis thaliana
AT3G18035 2.0kb upstream 2.0kb upstream 4635 true Chr3: 6169090-6173724 Arabidopsis thaliana
AT3G18035 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6171725-6173724 Arabidopsis thaliana
AT3G18035 2.0kb downstream 2.0kb downstream 4635 true Chr3: 6167090-6171724 Arabidopsis thaliana
AT3G18035 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6167090-6169089 Arabidopsis thaliana
AT3G18035 5.0kb upstream 5.0kb upstream 7635 true Chr3: 6169090-6176724 Arabidopsis thaliana
AT3G18035 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6171725-6176724 Arabidopsis thaliana
AT3G18035 5.0kb downstream 5.0kb downstream 7635 true Chr3: 6164090-6171724 Arabidopsis thaliana
AT3G18035 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6164090-6169089 Arabidopsis thaliana
AT3G18035 10.0kb upstream 10.0kb upstream 12635 true Chr3: 6169090-6181724 Arabidopsis thaliana
AT3G18035 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6171725-6181724 Arabidopsis thaliana
AT3G18035 10.0kb downstream 10.0kb downstream 12635 true Chr3: 6159090-6171724 Arabidopsis thaliana
AT3G18035 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6159090-6169089 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122373690 5261 Brassicaceae View MSA
123800602 5264 Brassicales-Malvales View MSA
124349983 5266 SBM View MSA
124239615 5268 Malvidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.868     High High
cufflinks 28.598        
cufflinks 30.04     High  
cufflinks 27.594        
cufflinks 28.083     High  
cufflinks 24.301       Low

0 Strain