Gene : AT3G57810 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12419//PTHR12419:SF25 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4836
Name:  ? AT3G57810 Secondary Identifier:  ? PAC:19660732
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G57810 0.5kb upstream 0.5kb upstream 2665 true Chr3: 21415284-21417948 Arabidopsis thaliana
AT3G57810 0.5kb upstream 0.5kb upstream 500 false Chr3: 21415284-21415783 Arabidopsis thaliana
AT3G57810 0.5kb downstream 0.5kb downstream 2665 true Chr3: 21415784-21418448 Arabidopsis thaliana
AT3G57810 0.5kb downstream 0.5kb downstream 500 false Chr3: 21417949-21418448 Arabidopsis thaliana
AT3G57810 1.0kb upstream 1.0kb upstream 3165 true Chr3: 21414784-21417948 Arabidopsis thaliana
AT3G57810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21414784-21415783 Arabidopsis thaliana
AT3G57810 1.0kb downstream 1.0kb downstream 3165 true Chr3: 21415784-21418948 Arabidopsis thaliana
AT3G57810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21417949-21418948 Arabidopsis thaliana
AT3G57810 2.0kb upstream 2.0kb upstream 4165 true Chr3: 21413784-21417948 Arabidopsis thaliana
AT3G57810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21413784-21415783 Arabidopsis thaliana
AT3G57810 2.0kb downstream 2.0kb downstream 4165 true Chr3: 21415784-21419948 Arabidopsis thaliana
AT3G57810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21417949-21419948 Arabidopsis thaliana
AT3G57810 5.0kb upstream 5.0kb upstream 7165 true Chr3: 21410784-21417948 Arabidopsis thaliana
AT3G57810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21410784-21415783 Arabidopsis thaliana
AT3G57810 5.0kb downstream 5.0kb downstream 7165 true Chr3: 21415784-21422948 Arabidopsis thaliana
AT3G57810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21417949-21422948 Arabidopsis thaliana
AT3G57810 10.0kb upstream 10.0kb upstream 12165 true Chr3: 21405784-21417948 Arabidopsis thaliana
AT3G57810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21405784-21415783 Arabidopsis thaliana
AT3G57810 10.0kb downstream 10.0kb downstream 12165 true Chr3: 21415784-21427948 Arabidopsis thaliana
AT3G57810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21417949-21427948 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
122363214 5261 Brassicaceae View MSA
123829764 5264 Brassicales-Malvales View MSA
124337615 5266 SBM View MSA
124242975 5268 Malvidae View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.523        
cufflinks 2.682        
cufflinks 2.567        
cufflinks 2.388        
cufflinks 2.552        
cufflinks 1.997       Low

0 Strain