Gene : UBA2A A. thaliana TAIR10
Primary Identifier:  ? AT3G56860 Defline:  (1 of 1) KOG0148//KOG4205 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1
Genomic Order:  4737 Name:  ? AT3G56860
Secondary Identifier:  ? PAC:19661468
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56860 0.5kb upstream 0.5kb upstream 4042 true Chr3: 21048745-21052786 Arabidopsis thaliana
AT3G56860 0.5kb upstream 0.5kb upstream 500 false Chr3: 21052287-21052786 Arabidopsis thaliana
AT3G56860 0.5kb downstream 0.5kb downstream 4042 true Chr3: 21048245-21052286 Arabidopsis thaliana
AT3G56860 0.5kb downstream 0.5kb downstream 500 false Chr3: 21048245-21048744 Arabidopsis thaliana
AT3G56860 1.0kb upstream 1.0kb upstream 4542 true Chr3: 21048745-21053286 Arabidopsis thaliana
AT3G56860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21052287-21053286 Arabidopsis thaliana
AT3G56860 1.0kb downstream 1.0kb downstream 4542 true Chr3: 21047745-21052286 Arabidopsis thaliana
AT3G56860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21047745-21048744 Arabidopsis thaliana
AT3G56860 2.0kb upstream 2.0kb upstream 5542 true Chr3: 21048745-21054286 Arabidopsis thaliana
AT3G56860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21052287-21054286 Arabidopsis thaliana
AT3G56860 2.0kb downstream 2.0kb downstream 5542 true Chr3: 21046745-21052286 Arabidopsis thaliana
AT3G56860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21046745-21048744 Arabidopsis thaliana
AT3G56860 5.0kb upstream 5.0kb upstream 8542 true Chr3: 21048745-21057286 Arabidopsis thaliana
AT3G56860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21052287-21057286 Arabidopsis thaliana
AT3G56860 5.0kb downstream 5.0kb downstream 8542 true Chr3: 21043745-21052286 Arabidopsis thaliana
AT3G56860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21043745-21048744 Arabidopsis thaliana
AT3G56860 10.0kb upstream 10.0kb upstream 13542 true Chr3: 21048745-21062286 Arabidopsis thaliana
AT3G56860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21052287-21062286 Arabidopsis thaliana
AT3G56860 10.0kb downstream 10.0kb downstream 13542 true Chr3: 21038745-21052286 Arabidopsis thaliana
AT3G56860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21038745-21048744 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375081 5261 Brassicaceae View MSA
123840806 5264 Brassicales-Malvales View MSA
124342346 5266 SBM View MSA
124254160 5268 Malvidae View MSA
124069346 5270 Rosid View MSA
123739331 5271 Pentapetalae View MSA
122793015 5272 Eudicot View MSA
122047267 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310718 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.252        
cufflinks 6.982        
cufflinks 6.217        
cufflinks 7.126       High
cufflinks 5.307       Low
cufflinks 6.043        

0 Strain