Gene : AT3G55490 A. thaliana TAIR10
Defline:  (1 of 2) K10734 - GINS complex subunit 3 (GINS3) Genomic Order:  4593
Name:  ? AT3G55490 Secondary Identifier:  ? PAC:19663551
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55490 0.5kb upstream 0.5kb upstream 2159 true Chr3: 20572024-20574182 Arabidopsis thaliana
AT3G55490 0.5kb upstream 0.5kb upstream 500 false Chr3: 20573683-20574182 Arabidopsis thaliana
AT3G55490 0.5kb downstream 0.5kb downstream 2159 true Chr3: 20571524-20573682 Arabidopsis thaliana
AT3G55490 0.5kb downstream 0.5kb downstream 500 false Chr3: 20571524-20572023 Arabidopsis thaliana
AT3G55490 1.0kb upstream 1.0kb upstream 2659 true Chr3: 20572024-20574682 Arabidopsis thaliana
AT3G55490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20573683-20574682 Arabidopsis thaliana
AT3G55490 1.0kb downstream 1.0kb downstream 2659 true Chr3: 20571024-20573682 Arabidopsis thaliana
AT3G55490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20571024-20572023 Arabidopsis thaliana
AT3G55490 2.0kb upstream 2.0kb upstream 3659 true Chr3: 20572024-20575682 Arabidopsis thaliana
AT3G55490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20573683-20575682 Arabidopsis thaliana
AT3G55490 2.0kb downstream 2.0kb downstream 3659 true Chr3: 20570024-20573682 Arabidopsis thaliana
AT3G55490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20570024-20572023 Arabidopsis thaliana
AT3G55490 5.0kb upstream 5.0kb upstream 6659 true Chr3: 20572024-20578682 Arabidopsis thaliana
AT3G55490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20573683-20578682 Arabidopsis thaliana
AT3G55490 5.0kb downstream 5.0kb downstream 6659 true Chr3: 20567024-20573682 Arabidopsis thaliana
AT3G55490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20567024-20572023 Arabidopsis thaliana
AT3G55490 10.0kb upstream 10.0kb upstream 11659 true Chr3: 20572024-20583682 Arabidopsis thaliana
AT3G55490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20573683-20583682 Arabidopsis thaliana
AT3G55490 10.0kb downstream 10.0kb downstream 11659 true Chr3: 20562024-20573682 Arabidopsis thaliana
AT3G55490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20562024-20572023 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370264 5261 Brassicaceae View MSA
123827557 5264 Brassicales-Malvales View MSA
124350493 5266 SBM View MSA
124243231 5268 Malvidae View MSA
124063238 5270 Rosid View MSA
123739987 5271 Pentapetalae View MSA
122789517 5272 Eudicot View MSA
122043204 5273 Angiosperm View MSA
121351583 5274 Embryophyte View MSA
123423787 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.157        
cufflinks 6.002       High
cufflinks 3.767        
cufflinks 5.505        
cufflinks 3.626       Low
cufflinks 5.272        

0 Strain