Gene : P5CS2 A. thaliana TAIR10
Primary Identifier:  ? AT3G55610 Defline:  (1 of 2) 2.7.2.11 - Glutamate 5-kinase / Gamma-glutamyl kinase
Genomic Order:  4609 Name:  ? AT3G55610
Secondary Identifier:  ? PAC:19660432
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARGININE-SYN4-PWY Arabidopsis thaliana pathologic  
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana PROSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3341 Arabidopsis thaliana pathologic  
Athaliana PWY-6922 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55610 0.5kb upstream 0.5kb upstream 5574 true Chr3: 20624020-20629593 Arabidopsis thaliana
AT3G55610 0.5kb upstream 0.5kb upstream 500 false Chr3: 20629094-20629593 Arabidopsis thaliana
AT3G55610 0.5kb downstream 0.5kb downstream 5574 true Chr3: 20623520-20629093 Arabidopsis thaliana
AT3G55610 0.5kb downstream 0.5kb downstream 500 false Chr3: 20623520-20624019 Arabidopsis thaliana
AT3G55610 1.0kb upstream 1.0kb upstream 6074 true Chr3: 20624020-20630093 Arabidopsis thaliana
AT3G55610 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20629094-20630093 Arabidopsis thaliana
AT3G55610 1.0kb downstream 1.0kb downstream 6074 true Chr3: 20623020-20629093 Arabidopsis thaliana
AT3G55610 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20623020-20624019 Arabidopsis thaliana
AT3G55610 2.0kb upstream 2.0kb upstream 7074 true Chr3: 20624020-20631093 Arabidopsis thaliana
AT3G55610 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20629094-20631093 Arabidopsis thaliana
AT3G55610 2.0kb downstream 2.0kb downstream 7074 true Chr3: 20622020-20629093 Arabidopsis thaliana
AT3G55610 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20622020-20624019 Arabidopsis thaliana
AT3G55610 5.0kb upstream 5.0kb upstream 10074 true Chr3: 20624020-20634093 Arabidopsis thaliana
AT3G55610 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20629094-20634093 Arabidopsis thaliana
AT3G55610 5.0kb downstream 5.0kb downstream 10074 true Chr3: 20619020-20629093 Arabidopsis thaliana
AT3G55610 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20619020-20624019 Arabidopsis thaliana
AT3G55610 10.0kb upstream 10.0kb upstream 15074 true Chr3: 20624020-20639093 Arabidopsis thaliana
AT3G55610 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20629094-20639093 Arabidopsis thaliana
AT3G55610 10.0kb downstream 10.0kb downstream 15074 true Chr3: 20614020-20629093 Arabidopsis thaliana
AT3G55610 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20614020-20624019 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364069 5261 Brassicaceae View MSA
123836624 5264 Brassicales-Malvales View MSA
124336591 5266 SBM View MSA
124242144 5268 Malvidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.708       Low
cufflinks 26.473        
cufflinks 24.892        
cufflinks 22.256        
cufflinks 36.985     High High
cufflinks 19.52        

0 Strain