Gene : RPL23AB A. thaliana TAIR10
Primary Identifier:  ? AT3G55280 Defline:  (1 of 2) K02893 - large subunit ribosomal protein L23Ae (RP-L23Ae, RPL23A)
Genomic Order:  4573 Name:  ? AT3G55280
Secondary Identifier:  ? PAC:19659108
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G55280 0.5kb upstream 0.5kb upstream 1875 true Chr3: 20499835-20501709 Arabidopsis thaliana
AT3G55280 0.5kb upstream 0.5kb upstream 500 false Chr3: 20499835-20500334 Arabidopsis thaliana
AT3G55280 0.5kb downstream 0.5kb downstream 1875 true Chr3: 20500335-20502209 Arabidopsis thaliana
AT3G55280 0.5kb downstream 0.5kb downstream 500 false Chr3: 20501710-20502209 Arabidopsis thaliana
AT3G55280 1.0kb upstream 1.0kb upstream 2375 true Chr3: 20499335-20501709 Arabidopsis thaliana
AT3G55280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20499335-20500334 Arabidopsis thaliana
AT3G55280 1.0kb downstream 1.0kb downstream 2375 true Chr3: 20500335-20502709 Arabidopsis thaliana
AT3G55280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20501710-20502709 Arabidopsis thaliana
AT3G55280 2.0kb upstream 2.0kb upstream 3375 true Chr3: 20498335-20501709 Arabidopsis thaliana
AT3G55280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20498335-20500334 Arabidopsis thaliana
AT3G55280 2.0kb downstream 2.0kb downstream 3375 true Chr3: 20500335-20503709 Arabidopsis thaliana
AT3G55280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20501710-20503709 Arabidopsis thaliana
AT3G55280 5.0kb upstream 5.0kb upstream 6375 true Chr3: 20495335-20501709 Arabidopsis thaliana
AT3G55280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20495335-20500334 Arabidopsis thaliana
AT3G55280 5.0kb downstream 5.0kb downstream 6375 true Chr3: 20500335-20506709 Arabidopsis thaliana
AT3G55280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20501710-20506709 Arabidopsis thaliana
AT3G55280 10.0kb upstream 10.0kb upstream 11375 true Chr3: 20490335-20501709 Arabidopsis thaliana
AT3G55280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20490335-20500334 Arabidopsis thaliana
AT3G55280 10.0kb downstream 10.0kb downstream 11375 true Chr3: 20500335-20511709 Arabidopsis thaliana
AT3G55280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20501710-20511709 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381484 5261 Brassicaceae View MSA
123832766 5264 Brassicales-Malvales View MSA
124350929 5266 SBM View MSA
124253645 5268 Malvidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.025        
cufflinks 30.294     High  
cufflinks 16.373        
cufflinks 32.804     High  
cufflinks 13.213       Low
cufflinks 40.264     High High

0 Strain