Gene : AMP1 A. thaliana TAIR10
Primary Identifier:  ? AT3G54720 Defline:  (1 of 1) PTHR10404//PTHR10404:SF42 - N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE // GLUTAMATE CARBOXYPEPTIDASE 2-RELATED
Genomic Order:  4510 Name:  ? AT3G54720
Secondary Identifier:  ? PAC:19660452
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54720 0.5kb upstream 0.5kb upstream 3624 true Chr3: 20254725-20258348 Arabidopsis thaliana
AT3G54720 0.5kb upstream 0.5kb upstream 500 false Chr3: 20257849-20258348 Arabidopsis thaliana
AT3G54720 0.5kb downstream 0.5kb downstream 3624 true Chr3: 20254225-20257848 Arabidopsis thaliana
AT3G54720 0.5kb downstream 0.5kb downstream 500 false Chr3: 20254225-20254724 Arabidopsis thaliana
AT3G54720 1.0kb upstream 1.0kb upstream 4124 true Chr3: 20254725-20258848 Arabidopsis thaliana
AT3G54720 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20257849-20258848 Arabidopsis thaliana
AT3G54720 1.0kb downstream 1.0kb downstream 4124 true Chr3: 20253725-20257848 Arabidopsis thaliana
AT3G54720 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20253725-20254724 Arabidopsis thaliana
AT3G54720 2.0kb upstream 2.0kb upstream 5124 true Chr3: 20254725-20259848 Arabidopsis thaliana
AT3G54720 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20257849-20259848 Arabidopsis thaliana
AT3G54720 2.0kb downstream 2.0kb downstream 5124 true Chr3: 20252725-20257848 Arabidopsis thaliana
AT3G54720 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20252725-20254724 Arabidopsis thaliana
AT3G54720 5.0kb upstream 5.0kb upstream 8124 true Chr3: 20254725-20262848 Arabidopsis thaliana
AT3G54720 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20257849-20262848 Arabidopsis thaliana
AT3G54720 5.0kb downstream 5.0kb downstream 8124 true Chr3: 20249725-20257848 Arabidopsis thaliana
AT3G54720 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20249725-20254724 Arabidopsis thaliana
AT3G54720 10.0kb upstream 10.0kb upstream 13124 true Chr3: 20254725-20267848 Arabidopsis thaliana
AT3G54720 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20257849-20267848 Arabidopsis thaliana
AT3G54720 10.0kb downstream 10.0kb downstream 13124 true Chr3: 20244725-20257848 Arabidopsis thaliana
AT3G54720 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20244725-20254724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369942 5261 Brassicaceae View MSA
123833388 5264 Brassicales-Malvales View MSA
124343960 5266 SBM View MSA
124238950 5268 Malvidae View MSA
124066108 5270 Rosid View MSA
123738632 5271 Pentapetalae View MSA
122791153 5272 Eudicot View MSA
122047569 5273 Angiosperm View MSA
121345590 5274 Embryophyte View MSA
123380240 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.014       Low
cufflinks 24.878        
cufflinks 7.571        
cufflinks 24.094        
cufflinks 7.03        
cufflinks 20.652        

0 Strain