Gene : GR A. thaliana TAIR10
Primary Identifier:  ? AT3G54660 Defline:  (1 of 1) PTHR22912:SF135 - GLUTATHIONE REDUCTASE, CHLOROPLASTIC
Genomic Order:  4504 Name:  ? AT3G54660
Secondary Identifier:  ? PAC:19662298
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUT-REDOX-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-4081 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54660 0.5kb upstream 0.5kb upstream 3939 true Chr3: 20229744-20233682 Arabidopsis thaliana
AT3G54660 0.5kb upstream 0.5kb upstream 500 false Chr3: 20233183-20233682 Arabidopsis thaliana
AT3G54660 0.5kb downstream 0.5kb downstream 3939 true Chr3: 20229244-20233182 Arabidopsis thaliana
AT3G54660 0.5kb downstream 0.5kb downstream 500 false Chr3: 20229244-20229743 Arabidopsis thaliana
AT3G54660 1.0kb upstream 1.0kb upstream 4439 true Chr3: 20229744-20234182 Arabidopsis thaliana
AT3G54660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20233183-20234182 Arabidopsis thaliana
AT3G54660 1.0kb downstream 1.0kb downstream 4439 true Chr3: 20228744-20233182 Arabidopsis thaliana
AT3G54660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20228744-20229743 Arabidopsis thaliana
AT3G54660 2.0kb upstream 2.0kb upstream 5439 true Chr3: 20229744-20235182 Arabidopsis thaliana
AT3G54660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20233183-20235182 Arabidopsis thaliana
AT3G54660 2.0kb downstream 2.0kb downstream 5439 true Chr3: 20227744-20233182 Arabidopsis thaliana
AT3G54660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20227744-20229743 Arabidopsis thaliana
AT3G54660 5.0kb upstream 5.0kb upstream 8439 true Chr3: 20229744-20238182 Arabidopsis thaliana
AT3G54660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20233183-20238182 Arabidopsis thaliana
AT3G54660 5.0kb downstream 5.0kb downstream 8439 true Chr3: 20224744-20233182 Arabidopsis thaliana
AT3G54660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20224744-20229743 Arabidopsis thaliana
AT3G54660 10.0kb upstream 10.0kb upstream 13439 true Chr3: 20229744-20243182 Arabidopsis thaliana
AT3G54660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20233183-20243182 Arabidopsis thaliana
AT3G54660 10.0kb downstream 10.0kb downstream 13439 true Chr3: 20219744-20233182 Arabidopsis thaliana
AT3G54660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20219744-20229743 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379589 5261 Brassicaceae View MSA
123827732 5264 Brassicales-Malvales View MSA
124337896 5266 SBM View MSA
124237838 5268 Malvidae View MSA
124063300 5270 Rosid View MSA
123737670 5271 Pentapetalae View MSA
122796892 5272 Eudicot View MSA
122045243 5273 Angiosperm View MSA
121344387 5274 Embryophyte View MSA
123424685 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.768     High  
cufflinks 22.296        
cufflinks 71.562     High High
cufflinks 21.845        
cufflinks 75.92     High High
cufflinks 20.56        

0 Strain