Gene : AT3G60510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  5108
Name:  ? AT3G60510 Secondary Identifier:  ? PAC:19660867
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7574 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60510 0.5kb upstream 0.5kb upstream 3696 true Chr3: 22356952-22360647 Arabidopsis thaliana
AT3G60510 0.5kb upstream 0.5kb upstream 500 false Chr3: 22360148-22360647 Arabidopsis thaliana
AT3G60510 0.5kb downstream 0.5kb downstream 3696 true Chr3: 22356452-22360147 Arabidopsis thaliana
AT3G60510 0.5kb downstream 0.5kb downstream 500 false Chr3: 22356452-22356951 Arabidopsis thaliana
AT3G60510 1.0kb upstream 1.0kb upstream 4196 true Chr3: 22356952-22361147 Arabidopsis thaliana
AT3G60510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22360148-22361147 Arabidopsis thaliana
AT3G60510 1.0kb downstream 1.0kb downstream 4196 true Chr3: 22355952-22360147 Arabidopsis thaliana
AT3G60510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22355952-22356951 Arabidopsis thaliana
AT3G60510 2.0kb upstream 2.0kb upstream 5196 true Chr3: 22356952-22362147 Arabidopsis thaliana
AT3G60510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22360148-22362147 Arabidopsis thaliana
AT3G60510 2.0kb downstream 2.0kb downstream 5196 true Chr3: 22354952-22360147 Arabidopsis thaliana
AT3G60510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22354952-22356951 Arabidopsis thaliana
AT3G60510 5.0kb upstream 5.0kb upstream 8196 true Chr3: 22356952-22365147 Arabidopsis thaliana
AT3G60510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22360148-22365147 Arabidopsis thaliana
AT3G60510 5.0kb downstream 5.0kb downstream 8196 true Chr3: 22351952-22360147 Arabidopsis thaliana
AT3G60510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22351952-22356951 Arabidopsis thaliana
AT3G60510 10.0kb upstream 10.0kb upstream 13196 true Chr3: 22356952-22370147 Arabidopsis thaliana
AT3G60510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22360148-22370147 Arabidopsis thaliana
AT3G60510 10.0kb downstream 10.0kb downstream 13196 true Chr3: 22346952-22360147 Arabidopsis thaliana
AT3G60510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22346952-22356951 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372333 5261 Brassicaceae View MSA
123827340 5264 Brassicales-Malvales View MSA
124337150 5266 SBM View MSA
124239754 5268 Malvidae View MSA
124065753 5270 Rosid View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.975        
cufflinks 0.995        
cufflinks 1.083        
cufflinks 1.035        
cufflinks 1.113       High
cufflinks 0.961       Low

0 Strain