Gene : AT3G59440 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10891//PTHR10891:SF578 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 4-RELATED Genomic Order:  5001
Name:  ? AT3G59440 Secondary Identifier:  ? PAC:19663973
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G59440 0.5kb upstream 0.5kb upstream 1268 true Chr3: 21969855-21971122 Arabidopsis thaliana
AT3G59440 0.5kb upstream 0.5kb upstream 500 false Chr3: 21969855-21970354 Arabidopsis thaliana
AT3G59440 0.5kb downstream 0.5kb downstream 1268 true Chr3: 21970355-21971622 Arabidopsis thaliana
AT3G59440 0.5kb downstream 0.5kb downstream 500 false Chr3: 21971123-21971622 Arabidopsis thaliana
AT3G59440 1.0kb upstream 1.0kb upstream 1768 true Chr3: 21969355-21971122 Arabidopsis thaliana
AT3G59440 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21969355-21970354 Arabidopsis thaliana
AT3G59440 1.0kb downstream 1.0kb downstream 1768 true Chr3: 21970355-21972122 Arabidopsis thaliana
AT3G59440 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21971123-21972122 Arabidopsis thaliana
AT3G59440 2.0kb upstream 2.0kb upstream 2768 true Chr3: 21968355-21971122 Arabidopsis thaliana
AT3G59440 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21968355-21970354 Arabidopsis thaliana
AT3G59440 2.0kb downstream 2.0kb downstream 2768 true Chr3: 21970355-21973122 Arabidopsis thaliana
AT3G59440 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21971123-21973122 Arabidopsis thaliana
AT3G59440 5.0kb upstream 5.0kb upstream 5768 true Chr3: 21965355-21971122 Arabidopsis thaliana
AT3G59440 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21965355-21970354 Arabidopsis thaliana
AT3G59440 5.0kb downstream 5.0kb downstream 5768 true Chr3: 21970355-21976122 Arabidopsis thaliana
AT3G59440 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21971123-21976122 Arabidopsis thaliana
AT3G59440 10.0kb upstream 10.0kb upstream 10768 true Chr3: 21960355-21971122 Arabidopsis thaliana
AT3G59440 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21960355-21970354 Arabidopsis thaliana
AT3G59440 10.0kb downstream 10.0kb downstream 10768 true Chr3: 21970355-21981122 Arabidopsis thaliana
AT3G59440 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21971123-21981122 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122366612 5261 Brassicaceae View MSA
123799212 5264 Brassicales-Malvales View MSA
124296758 5266 SBM View MSA
124252586 5268 Malvidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.262     Low  
cufflinks 5.821        
cufflinks 0.17     Low  
cufflinks 2.861        
cufflinks 0.015     Low Low
cufflinks 7.859       High

0 Strain