Gene : AT3G58150 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12499//PTHR12499:SF1 - OPTIC ATROPHY 3 PROTEIN OPA3 // OPTIC ATROPHY 3 PROTEIN (OPA3) Genomic Order:  4870
Name:  ? AT3G58150 Secondary Identifier:  ? PAC:19663172
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58150 0.5kb upstream 0.5kb upstream 1777 true Chr3: 21532813-21534589 Arabidopsis thaliana
AT3G58150 0.5kb upstream 0.5kb upstream 500 false Chr3: 21534090-21534589 Arabidopsis thaliana
AT3G58150 0.5kb downstream 0.5kb downstream 1777 true Chr3: 21532313-21534089 Arabidopsis thaliana
AT3G58150 0.5kb downstream 0.5kb downstream 500 false Chr3: 21532313-21532812 Arabidopsis thaliana
AT3G58150 1.0kb upstream 1.0kb upstream 2277 true Chr3: 21532813-21535089 Arabidopsis thaliana
AT3G58150 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21534090-21535089 Arabidopsis thaliana
AT3G58150 1.0kb downstream 1.0kb downstream 2277 true Chr3: 21531813-21534089 Arabidopsis thaliana
AT3G58150 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21531813-21532812 Arabidopsis thaliana
AT3G58150 2.0kb upstream 2.0kb upstream 3277 true Chr3: 21532813-21536089 Arabidopsis thaliana
AT3G58150 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21534090-21536089 Arabidopsis thaliana
AT3G58150 2.0kb downstream 2.0kb downstream 3277 true Chr3: 21530813-21534089 Arabidopsis thaliana
AT3G58150 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21530813-21532812 Arabidopsis thaliana
AT3G58150 5.0kb upstream 5.0kb upstream 6277 true Chr3: 21532813-21539089 Arabidopsis thaliana
AT3G58150 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21534090-21539089 Arabidopsis thaliana
AT3G58150 5.0kb downstream 5.0kb downstream 6277 true Chr3: 21527813-21534089 Arabidopsis thaliana
AT3G58150 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21527813-21532812 Arabidopsis thaliana
AT3G58150 10.0kb upstream 10.0kb upstream 11277 true Chr3: 21532813-21544089 Arabidopsis thaliana
AT3G58150 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21534090-21544089 Arabidopsis thaliana
AT3G58150 10.0kb downstream 10.0kb downstream 11277 true Chr3: 21522813-21534089 Arabidopsis thaliana
AT3G58150 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21522813-21532812 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364812 5261 Brassicaceae View MSA
123837367 5264 Brassicales-Malvales View MSA
124346868 5266 SBM View MSA
124239392 5268 Malvidae View MSA
124069580 5270 Rosid View MSA
123743505 5271 Pentapetalae View MSA
122788566 5272 Eudicot View MSA
122047456 5273 Angiosperm View MSA
121344261 5274 Embryophyte View MSA
123428065 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.967        
cufflinks 0.38        
cufflinks 2.138        
cufflinks 0.6        
cufflinks 2.39       High
cufflinks 0.087     Low Low

0 Strain