Gene : AT3G58260 A. thaliana TAIR10
Defline:  (1 of 64) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  4881
Name:  ? AT3G58260 Secondary Identifier:  ? PAC:19664498
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G58260 0.5kb upstream 0.5kb upstream 2116 true Chr3: 21573754-21575869 Arabidopsis thaliana
AT3G58260 0.5kb upstream 0.5kb upstream 500 false Chr3: 21575370-21575869 Arabidopsis thaliana
AT3G58260 0.5kb downstream 0.5kb downstream 2116 true Chr3: 21573254-21575369 Arabidopsis thaliana
AT3G58260 0.5kb downstream 0.5kb downstream 500 false Chr3: 21573254-21573753 Arabidopsis thaliana
AT3G58260 1.0kb upstream 1.0kb upstream 2616 true Chr3: 21573754-21576369 Arabidopsis thaliana
AT3G58260 1.0kb upstream 1.0kb upstream 1000 false Chr3: 21575370-21576369 Arabidopsis thaliana
AT3G58260 1.0kb downstream 1.0kb downstream 2616 true Chr3: 21572754-21575369 Arabidopsis thaliana
AT3G58260 1.0kb downstream 1.0kb downstream 1000 false Chr3: 21572754-21573753 Arabidopsis thaliana
AT3G58260 2.0kb upstream 2.0kb upstream 3616 true Chr3: 21573754-21577369 Arabidopsis thaliana
AT3G58260 2.0kb upstream 2.0kb upstream 2000 false Chr3: 21575370-21577369 Arabidopsis thaliana
AT3G58260 2.0kb downstream 2.0kb downstream 3616 true Chr3: 21571754-21575369 Arabidopsis thaliana
AT3G58260 2.0kb downstream 2.0kb downstream 2000 false Chr3: 21571754-21573753 Arabidopsis thaliana
AT3G58260 5.0kb upstream 5.0kb upstream 6616 true Chr3: 21573754-21580369 Arabidopsis thaliana
AT3G58260 5.0kb upstream 5.0kb upstream 5000 false Chr3: 21575370-21580369 Arabidopsis thaliana
AT3G58260 5.0kb downstream 5.0kb downstream 6616 true Chr3: 21568754-21575369 Arabidopsis thaliana
AT3G58260 5.0kb downstream 5.0kb downstream 5000 false Chr3: 21568754-21573753 Arabidopsis thaliana
AT3G58260 10.0kb upstream 10.0kb upstream 11616 true Chr3: 21573754-21585369 Arabidopsis thaliana
AT3G58260 10.0kb upstream 10.0kb upstream 10000 false Chr3: 21575370-21585369 Arabidopsis thaliana
AT3G58260 10.0kb downstream 10.0kb downstream 11616 true Chr3: 21563754-21575369 Arabidopsis thaliana
AT3G58260 10.0kb downstream 10.0kb downstream 10000 false Chr3: 21563754-21573753 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122338663 5261 Brassicaceae View MSA
123779217 5264 Brassicales-Malvales View MSA
124277547 5266 SBM View MSA
124132735 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain