Gene : AT3G49100 A. thaliana TAIR10
Defline:  (1 of 1) K03109 - signal recognition particle subunit SRP9 (SRP9) Genomic Order:  3905
Name:  ? AT3G49100 Secondary Identifier:  ? PAC:19660182
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G49100 0.5kb upstream 0.5kb upstream 2119 true Chr3: 18196339-18198457 Arabidopsis thaliana
AT3G49100 0.5kb upstream 0.5kb upstream 500 false Chr3: 18196339-18196838 Arabidopsis thaliana
AT3G49100 0.5kb downstream 0.5kb downstream 2119 true Chr3: 18196839-18198957 Arabidopsis thaliana
AT3G49100 0.5kb downstream 0.5kb downstream 500 false Chr3: 18198458-18198957 Arabidopsis thaliana
AT3G49100 1.0kb upstream 1.0kb upstream 2619 true Chr3: 18195839-18198457 Arabidopsis thaliana
AT3G49100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18195839-18196838 Arabidopsis thaliana
AT3G49100 1.0kb downstream 1.0kb downstream 2619 true Chr3: 18196839-18199457 Arabidopsis thaliana
AT3G49100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18198458-18199457 Arabidopsis thaliana
AT3G49100 2.0kb upstream 2.0kb upstream 3619 true Chr3: 18194839-18198457 Arabidopsis thaliana
AT3G49100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18194839-18196838 Arabidopsis thaliana
AT3G49100 2.0kb downstream 2.0kb downstream 3619 true Chr3: 18196839-18200457 Arabidopsis thaliana
AT3G49100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18198458-18200457 Arabidopsis thaliana
AT3G49100 5.0kb upstream 5.0kb upstream 6619 true Chr3: 18191839-18198457 Arabidopsis thaliana
AT3G49100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18191839-18196838 Arabidopsis thaliana
AT3G49100 5.0kb downstream 5.0kb downstream 6619 true Chr3: 18196839-18203457 Arabidopsis thaliana
AT3G49100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18198458-18203457 Arabidopsis thaliana
AT3G49100 10.0kb upstream 10.0kb upstream 11619 true Chr3: 18186839-18198457 Arabidopsis thaliana
AT3G49100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18186839-18196838 Arabidopsis thaliana
AT3G49100 10.0kb downstream 10.0kb downstream 11619 true Chr3: 18196839-18208457 Arabidopsis thaliana
AT3G49100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18198458-18208457 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373383 5261 Brassicaceae View MSA
123827492 5264 Brassicales-Malvales View MSA
124341664 5266 SBM View MSA
124237986 5268 Malvidae View MSA
124061041 5270 Rosid View MSA
123743448 5271 Pentapetalae View MSA
122791780 5272 Eudicot View MSA
122044032 5273 Angiosperm View MSA
121347792 5274 Embryophyte View MSA
123425119 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.065        
cufflinks 9.927       High
cufflinks 6.344       Low
cufflinks 9.186        
cufflinks 6.444       Low
cufflinks 9.821        

0 Strain