Gene : AT3G48770 A. thaliana TAIR10
Defline:  (1 of 2) K17592 - sacsin (SACS) Genomic Order:  3872
Name:  ? AT3G48770 Secondary Identifier:  ? PAC:19663632
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48770 0.5kb upstream 0.5kb upstream 8844 true Chr3: 18078474-18087317 Arabidopsis thaliana
AT3G48770 0.5kb upstream 0.5kb upstream 500 false Chr3: 18086818-18087317 Arabidopsis thaliana
AT3G48770 0.5kb downstream 0.5kb downstream 8844 true Chr3: 18077974-18086817 Arabidopsis thaliana
AT3G48770 0.5kb downstream 0.5kb downstream 500 false Chr3: 18077974-18078473 Arabidopsis thaliana
AT3G48770 1.0kb upstream 1.0kb upstream 9344 true Chr3: 18078474-18087817 Arabidopsis thaliana
AT3G48770 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18086818-18087817 Arabidopsis thaliana
AT3G48770 1.0kb downstream 1.0kb downstream 9344 true Chr3: 18077474-18086817 Arabidopsis thaliana
AT3G48770 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18077474-18078473 Arabidopsis thaliana
AT3G48770 2.0kb upstream 2.0kb upstream 10344 true Chr3: 18078474-18088817 Arabidopsis thaliana
AT3G48770 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18086818-18088817 Arabidopsis thaliana
AT3G48770 2.0kb downstream 2.0kb downstream 10344 true Chr3: 18076474-18086817 Arabidopsis thaliana
AT3G48770 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18076474-18078473 Arabidopsis thaliana
AT3G48770 5.0kb upstream 5.0kb upstream 13344 true Chr3: 18078474-18091817 Arabidopsis thaliana
AT3G48770 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18086818-18091817 Arabidopsis thaliana
AT3G48770 5.0kb downstream 5.0kb downstream 13344 true Chr3: 18073474-18086817 Arabidopsis thaliana
AT3G48770 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18073474-18078473 Arabidopsis thaliana
AT3G48770 10.0kb upstream 10.0kb upstream 18344 true Chr3: 18078474-18096817 Arabidopsis thaliana
AT3G48770 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18086818-18096817 Arabidopsis thaliana
AT3G48770 10.0kb downstream 10.0kb downstream 18344 true Chr3: 18068474-18086817 Arabidopsis thaliana
AT3G48770 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18068474-18078473 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376881 5261 Brassicaceae View MSA
123827678 5264 Brassicales-Malvales View MSA
124350631 5266 SBM View MSA
124252588 5268 Malvidae View MSA
124072645 5270 Rosid View MSA
123743971 5271 Pentapetalae View MSA
122792746 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.275     Low  
cufflinks 4.55       High
cufflinks 0.099     Low  
cufflinks 2.528        
cufflinks 0.055     Low Low
cufflinks 3.625        

0 Strain