Gene : AT3G48030 A. thaliana TAIR10
Defline:  (1 of 1) KOG4431 - Uncharacterized protein, induced by hypoxia Genomic Order:  3788
Name:  ? AT3G48030 Secondary Identifier:  ? PAC:19661284
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48030 0.5kb upstream 0.5kb upstream 3045 true Chr3: 17725410-17728454 Arabidopsis thaliana
AT3G48030 0.5kb upstream 0.5kb upstream 500 false Chr3: 17727955-17728454 Arabidopsis thaliana
AT3G48030 0.5kb downstream 0.5kb downstream 3045 true Chr3: 17724910-17727954 Arabidopsis thaliana
AT3G48030 0.5kb downstream 0.5kb downstream 500 false Chr3: 17724910-17725409 Arabidopsis thaliana
AT3G48030 1.0kb upstream 1.0kb upstream 3545 true Chr3: 17725410-17728954 Arabidopsis thaliana
AT3G48030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17727955-17728954 Arabidopsis thaliana
AT3G48030 1.0kb downstream 1.0kb downstream 3545 true Chr3: 17724410-17727954 Arabidopsis thaliana
AT3G48030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17724410-17725409 Arabidopsis thaliana
AT3G48030 2.0kb upstream 2.0kb upstream 4545 true Chr3: 17725410-17729954 Arabidopsis thaliana
AT3G48030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17727955-17729954 Arabidopsis thaliana
AT3G48030 2.0kb downstream 2.0kb downstream 4545 true Chr3: 17723410-17727954 Arabidopsis thaliana
AT3G48030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17723410-17725409 Arabidopsis thaliana
AT3G48030 5.0kb upstream 5.0kb upstream 7545 true Chr3: 17725410-17732954 Arabidopsis thaliana
AT3G48030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17727955-17732954 Arabidopsis thaliana
AT3G48030 5.0kb downstream 5.0kb downstream 7545 true Chr3: 17720410-17727954 Arabidopsis thaliana
AT3G48030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17720410-17725409 Arabidopsis thaliana
AT3G48030 10.0kb upstream 10.0kb upstream 12545 true Chr3: 17725410-17737954 Arabidopsis thaliana
AT3G48030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17727955-17737954 Arabidopsis thaliana
AT3G48030 10.0kb downstream 10.0kb downstream 12545 true Chr3: 17715410-17727954 Arabidopsis thaliana
AT3G48030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17715410-17725409 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503009 5273 Angiosperm View MSA
122344108 5261 Brassicaceae View MSA
123784158 5264 Brassicales-Malvales View MSA
124282356 5266 SBM View MSA
124136975 5268 Malvidae View MSA
123864753 5270 Rosid View MSA
123450036 5271 Pentapetalae View MSA
122485563 5272 Eudicot View MSA
120776305 5274 Embryophyte View MSA
122818582 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.332        
cufflinks 11.368       High
cufflinks 5.311        
cufflinks 9.168        
cufflinks 4.876       Low
cufflinks 11.128       High

0 Strain