Gene : ASN1 A. thaliana TAIR10
Primary Identifier:  ? AT3G47340 Defline:  (1 of 3) K01953 - asparagine synthase (glutamine-hydrolysing) (asnB, ASNS)
Genomic Order:  3716 Name:  ? AT3G47340
Secondary Identifier:  ? PAC:19658363
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ASPARAGINE-BIOSYNTHESIS Arabidopsis thaliana pathologic  
Athaliana ASPARAGINESYN-PWY Arabidopsis thaliana pathologic  
Athaliana CITRULBIO-PWY Arabidopsis thaliana pathologic  
Athaliana GLUTAMINDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY0-1325 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G47340 0.5kb upstream 0.5kb upstream 3860 true Chr3: 17437884-17441743 Arabidopsis thaliana
AT3G47340 0.5kb upstream 0.5kb upstream 500 false Chr3: 17441244-17441743 Arabidopsis thaliana
AT3G47340 0.5kb downstream 0.5kb downstream 3860 true Chr3: 17437384-17441243 Arabidopsis thaliana
AT3G47340 0.5kb downstream 0.5kb downstream 500 false Chr3: 17437384-17437883 Arabidopsis thaliana
AT3G47340 1.0kb upstream 1.0kb upstream 4360 true Chr3: 17437884-17442243 Arabidopsis thaliana
AT3G47340 1.0kb upstream 1.0kb upstream 1000 false Chr3: 17441244-17442243 Arabidopsis thaliana
AT3G47340 1.0kb downstream 1.0kb downstream 4360 true Chr3: 17436884-17441243 Arabidopsis thaliana
AT3G47340 1.0kb downstream 1.0kb downstream 1000 false Chr3: 17436884-17437883 Arabidopsis thaliana
AT3G47340 2.0kb upstream 2.0kb upstream 5360 true Chr3: 17437884-17443243 Arabidopsis thaliana
AT3G47340 2.0kb upstream 2.0kb upstream 2000 false Chr3: 17441244-17443243 Arabidopsis thaliana
AT3G47340 2.0kb downstream 2.0kb downstream 5360 true Chr3: 17435884-17441243 Arabidopsis thaliana
AT3G47340 2.0kb downstream 2.0kb downstream 2000 false Chr3: 17435884-17437883 Arabidopsis thaliana
AT3G47340 5.0kb upstream 5.0kb upstream 8360 true Chr3: 17437884-17446243 Arabidopsis thaliana
AT3G47340 5.0kb upstream 5.0kb upstream 5000 false Chr3: 17441244-17446243 Arabidopsis thaliana
AT3G47340 5.0kb downstream 5.0kb downstream 8360 true Chr3: 17432884-17441243 Arabidopsis thaliana
AT3G47340 5.0kb downstream 5.0kb downstream 5000 false Chr3: 17432884-17437883 Arabidopsis thaliana
AT3G47340 10.0kb upstream 10.0kb upstream 13360 true Chr3: 17437884-17451243 Arabidopsis thaliana
AT3G47340 10.0kb upstream 10.0kb upstream 10000 false Chr3: 17441244-17451243 Arabidopsis thaliana
AT3G47340 10.0kb downstream 10.0kb downstream 13360 true Chr3: 17427884-17441243 Arabidopsis thaliana
AT3G47340 10.0kb downstream 10.0kb downstream 10000 false Chr3: 17427884-17437883 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377410 5261 Brassicaceae View MSA
123828929 5264 Brassicales-Malvales View MSA
124342232 5266 SBM View MSA
124241021 5268 Malvidae View MSA
124069431 5270 Rosid View MSA
123745060 5271 Pentapetalae View MSA
122793477 5272 Eudicot View MSA
122046808 5273 Angiosperm View MSA
121344420 5274 Embryophyte View MSA
123427141 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.327       Low
cufflinks 5.786        
cufflinks 36.781     High  
cufflinks 13.38        
cufflinks 74.62     High High
cufflinks 5.266        

0 Strain