Gene : PTR1 A. thaliana TAIR10
Primary Identifier:  ? AT3G54140 Defline:  (1 of 2) K14638 - solute carrier family 15 (peptide/histidine transporter), member 3/4 (SLC15A3_4, PHT)
Genomic Order:  4453 Name:  ? AT3G54140
Secondary Identifier:  ? PAC:19659455
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G54140 0.5kb upstream 0.5kb upstream 3410 true Chr3: 20045663-20049072 Arabidopsis thaliana
AT3G54140 0.5kb upstream 0.5kb upstream 500 false Chr3: 20048573-20049072 Arabidopsis thaliana
AT3G54140 0.5kb downstream 0.5kb downstream 3410 true Chr3: 20045163-20048572 Arabidopsis thaliana
AT3G54140 0.5kb downstream 0.5kb downstream 500 false Chr3: 20045163-20045662 Arabidopsis thaliana
AT3G54140 1.0kb upstream 1.0kb upstream 3910 true Chr3: 20045663-20049572 Arabidopsis thaliana
AT3G54140 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20048573-20049572 Arabidopsis thaliana
AT3G54140 1.0kb downstream 1.0kb downstream 3910 true Chr3: 20044663-20048572 Arabidopsis thaliana
AT3G54140 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20044663-20045662 Arabidopsis thaliana
AT3G54140 2.0kb upstream 2.0kb upstream 4910 true Chr3: 20045663-20050572 Arabidopsis thaliana
AT3G54140 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20048573-20050572 Arabidopsis thaliana
AT3G54140 2.0kb downstream 2.0kb downstream 4910 true Chr3: 20043663-20048572 Arabidopsis thaliana
AT3G54140 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20043663-20045662 Arabidopsis thaliana
AT3G54140 5.0kb upstream 5.0kb upstream 7910 true Chr3: 20045663-20053572 Arabidopsis thaliana
AT3G54140 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20048573-20053572 Arabidopsis thaliana
AT3G54140 5.0kb downstream 5.0kb downstream 7910 true Chr3: 20040663-20048572 Arabidopsis thaliana
AT3G54140 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20040663-20045662 Arabidopsis thaliana
AT3G54140 10.0kb upstream 10.0kb upstream 12910 true Chr3: 20045663-20058572 Arabidopsis thaliana
AT3G54140 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20048573-20058572 Arabidopsis thaliana
AT3G54140 10.0kb downstream 10.0kb downstream 12910 true Chr3: 20035663-20048572 Arabidopsis thaliana
AT3G54140 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20035663-20045662 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362911 5261 Brassicaceae View MSA
123836861 5264 Brassicales-Malvales View MSA
124340673 5266 SBM View MSA
124246059 5268 Malvidae View MSA
124065888 5270 Rosid View MSA
123751146 5271 Pentapetalae View MSA
122796632 5272 Eudicot View MSA
122045333 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.084        
cufflinks 15.494        
cufflinks 15.572        
cufflinks 24.679       High
cufflinks 15.578        
cufflinks 16.766        

0 Strain