Gene : ACA1 A. thaliana TAIR10
Primary Identifier:  ? AT3G52720 Defline:  (1 of 1) PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED
Genomic Order:  4299 Name:  ? AT3G52720
Secondary Identifier:  ? PAC:19665137
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYANCAT-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-241 Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  
Athaliana PWY-7117 Arabidopsis thaliana pathologic  
Athaliana PWYQT-4429 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52720 0.5kb upstream 0.5kb upstream 3095 true Chr3: 19538690-19541784 Arabidopsis thaliana
AT3G52720 0.5kb upstream 0.5kb upstream 500 false Chr3: 19541285-19541784 Arabidopsis thaliana
AT3G52720 0.5kb downstream 0.5kb downstream 3095 true Chr3: 19538190-19541284 Arabidopsis thaliana
AT3G52720 0.5kb downstream 0.5kb downstream 500 false Chr3: 19538190-19538689 Arabidopsis thaliana
AT3G52720 1.0kb upstream 1.0kb upstream 3595 true Chr3: 19538690-19542284 Arabidopsis thaliana
AT3G52720 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19541285-19542284 Arabidopsis thaliana
AT3G52720 1.0kb downstream 1.0kb downstream 3595 true Chr3: 19537690-19541284 Arabidopsis thaliana
AT3G52720 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19537690-19538689 Arabidopsis thaliana
AT3G52720 2.0kb upstream 2.0kb upstream 4595 true Chr3: 19538690-19543284 Arabidopsis thaliana
AT3G52720 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19541285-19543284 Arabidopsis thaliana
AT3G52720 2.0kb downstream 2.0kb downstream 4595 true Chr3: 19536690-19541284 Arabidopsis thaliana
AT3G52720 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19536690-19538689 Arabidopsis thaliana
AT3G52720 5.0kb upstream 5.0kb upstream 7595 true Chr3: 19538690-19546284 Arabidopsis thaliana
AT3G52720 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19541285-19546284 Arabidopsis thaliana
AT3G52720 5.0kb downstream 5.0kb downstream 7595 true Chr3: 19533690-19541284 Arabidopsis thaliana
AT3G52720 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19533690-19538689 Arabidopsis thaliana
AT3G52720 10.0kb upstream 10.0kb upstream 12595 true Chr3: 19538690-19551284 Arabidopsis thaliana
AT3G52720 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19541285-19551284 Arabidopsis thaliana
AT3G52720 10.0kb downstream 10.0kb downstream 12595 true Chr3: 19528690-19541284 Arabidopsis thaliana
AT3G52720 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19528690-19538689 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378920 5261 Brassicaceae View MSA
123837030 5264 Brassicales-Malvales View MSA
124346986 5266 SBM View MSA
124246134 5268 Malvidae View MSA
124069270 5270 Rosid View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.605        
cufflinks 0.039     Low Low
cufflinks 6.575        
cufflinks 0.333     Low  
cufflinks 5.366        
cufflinks 0.04     Low Low

0 Strain