Gene : AT3G52740 A. thaliana TAIR10
Genomic Order:  4301 Name:  ? AT3G52740
Secondary Identifier:  ? PAC:19659943
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G52740 0.5kb upstream 0.5kb upstream 1091 true Chr3: 19546374-19547464 Arabidopsis thaliana
AT3G52740 0.5kb upstream 0.5kb upstream 500 false Chr3: 19546965-19547464 Arabidopsis thaliana
AT3G52740 0.5kb downstream 0.5kb downstream 1091 true Chr3: 19545874-19546964 Arabidopsis thaliana
AT3G52740 0.5kb downstream 0.5kb downstream 500 false Chr3: 19545874-19546373 Arabidopsis thaliana
AT3G52740 1.0kb upstream 1.0kb upstream 1591 true Chr3: 19546374-19547964 Arabidopsis thaliana
AT3G52740 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19546965-19547964 Arabidopsis thaliana
AT3G52740 1.0kb downstream 1.0kb downstream 1591 true Chr3: 19545374-19546964 Arabidopsis thaliana
AT3G52740 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19545374-19546373 Arabidopsis thaliana
AT3G52740 2.0kb upstream 2.0kb upstream 2591 true Chr3: 19546374-19548964 Arabidopsis thaliana
AT3G52740 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19546965-19548964 Arabidopsis thaliana
AT3G52740 2.0kb downstream 2.0kb downstream 2591 true Chr3: 19544374-19546964 Arabidopsis thaliana
AT3G52740 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19544374-19546373 Arabidopsis thaliana
AT3G52740 5.0kb upstream 5.0kb upstream 5591 true Chr3: 19546374-19551964 Arabidopsis thaliana
AT3G52740 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19546965-19551964 Arabidopsis thaliana
AT3G52740 5.0kb downstream 5.0kb downstream 5591 true Chr3: 19541374-19546964 Arabidopsis thaliana
AT3G52740 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19541374-19546373 Arabidopsis thaliana
AT3G52740 10.0kb upstream 10.0kb upstream 10591 true Chr3: 19546374-19556964 Arabidopsis thaliana
AT3G52740 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19546965-19556964 Arabidopsis thaliana
AT3G52740 10.0kb downstream 10.0kb downstream 10591 true Chr3: 19536374-19546964 Arabidopsis thaliana
AT3G52740 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19536374-19546373 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367683 5261 Brassicaceae View MSA
123839148 5264 Brassicales-Malvales View MSA
124322563 5266 SBM View MSA
124251103 5268 Malvidae View MSA
124068213 5270 Rosid View MSA
123748215 5271 Pentapetalae View MSA
122795836 5272 Eudicot View MSA
122048634 5273 Angiosperm View MSA
121350255 5274 Embryophyte View MSA
123381647 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.472        
cufflinks 0.127     Low  
cufflinks 5.764        
cufflinks 0.027     Low Low
cufflinks 6.564        
cufflinks 0.055     Low  

0 Strain