Gene : CPK13 A. thaliana TAIR10
Primary Identifier:  ? AT3G51850 Defline:  (1 of 1) PTHR24349//PTHR24349:SF145 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED
Genomic Order:  4207 Name:  ? AT3G51850
Secondary Identifier:  ? PAC:19661030
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51850 0.5kb upstream 0.5kb upstream 3923 true Chr3: 19231967-19235889 Arabidopsis thaliana
AT3G51850 0.5kb upstream 0.5kb upstream 500 false Chr3: 19231967-19232466 Arabidopsis thaliana
AT3G51850 0.5kb downstream 0.5kb downstream 3923 true Chr3: 19232467-19236389 Arabidopsis thaliana
AT3G51850 0.5kb downstream 0.5kb downstream 500 false Chr3: 19235890-19236389 Arabidopsis thaliana
AT3G51850 1.0kb upstream 1.0kb upstream 4423 true Chr3: 19231467-19235889 Arabidopsis thaliana
AT3G51850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19231467-19232466 Arabidopsis thaliana
AT3G51850 1.0kb downstream 1.0kb downstream 4423 true Chr3: 19232467-19236889 Arabidopsis thaliana
AT3G51850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19235890-19236889 Arabidopsis thaliana
AT3G51850 2.0kb upstream 2.0kb upstream 5423 true Chr3: 19230467-19235889 Arabidopsis thaliana
AT3G51850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19230467-19232466 Arabidopsis thaliana
AT3G51850 2.0kb downstream 2.0kb downstream 5423 true Chr3: 19232467-19237889 Arabidopsis thaliana
AT3G51850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19235890-19237889 Arabidopsis thaliana
AT3G51850 5.0kb upstream 5.0kb upstream 8423 true Chr3: 19227467-19235889 Arabidopsis thaliana
AT3G51850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19227467-19232466 Arabidopsis thaliana
AT3G51850 5.0kb downstream 5.0kb downstream 8423 true Chr3: 19232467-19240889 Arabidopsis thaliana
AT3G51850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19235890-19240889 Arabidopsis thaliana
AT3G51850 10.0kb upstream 10.0kb upstream 13423 true Chr3: 19222467-19235889 Arabidopsis thaliana
AT3G51850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19222467-19232466 Arabidopsis thaliana
AT3G51850 10.0kb downstream 10.0kb downstream 13423 true Chr3: 19232467-19245889 Arabidopsis thaliana
AT3G51850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19235890-19245889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374868 5261 Brassicaceae View MSA
123840160 5264 Brassicales-Malvales View MSA
124344631 5266 SBM View MSA
124241627 5268 Malvidae View MSA
124062944 5270 Rosid View MSA
123751809 5271 Pentapetalae View MSA
122786253 5272 Eudicot View MSA
122050493 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.798        
cufflinks 31.984     High  
cufflinks 16.807        
cufflinks 29.697        
cufflinks 16.057       Low
cufflinks 38.375     High High

0 Strain