Gene : ROP1 A. thaliana TAIR10
Primary Identifier:  ? AT3G51300 Defline:  (1 of 3) PTHR24072:SF179 - RAC-LIKE GTP-BINDING PROTEIN ARAC1-RELATED
Genomic Order:  4147 Name:  ? AT3G51300
Secondary Identifier:  ? PAC:19661230
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51300 0.5kb upstream 0.5kb upstream 1986 true Chr3: 19042387-19044372 Arabidopsis thaliana
AT3G51300 0.5kb upstream 0.5kb upstream 500 false Chr3: 19042387-19042886 Arabidopsis thaliana
AT3G51300 0.5kb downstream 0.5kb downstream 1986 true Chr3: 19042887-19044872 Arabidopsis thaliana
AT3G51300 0.5kb downstream 0.5kb downstream 500 false Chr3: 19044373-19044872 Arabidopsis thaliana
AT3G51300 1.0kb upstream 1.0kb upstream 2486 true Chr3: 19041887-19044372 Arabidopsis thaliana
AT3G51300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 19041887-19042886 Arabidopsis thaliana
AT3G51300 1.0kb downstream 1.0kb downstream 2486 true Chr3: 19042887-19045372 Arabidopsis thaliana
AT3G51300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 19044373-19045372 Arabidopsis thaliana
AT3G51300 2.0kb upstream 2.0kb upstream 3486 true Chr3: 19040887-19044372 Arabidopsis thaliana
AT3G51300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 19040887-19042886 Arabidopsis thaliana
AT3G51300 2.0kb downstream 2.0kb downstream 3486 true Chr3: 19042887-19046372 Arabidopsis thaliana
AT3G51300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 19044373-19046372 Arabidopsis thaliana
AT3G51300 5.0kb upstream 5.0kb upstream 6486 true Chr3: 19037887-19044372 Arabidopsis thaliana
AT3G51300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 19037887-19042886 Arabidopsis thaliana
AT3G51300 5.0kb downstream 5.0kb downstream 6486 true Chr3: 19042887-19049372 Arabidopsis thaliana
AT3G51300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 19044373-19049372 Arabidopsis thaliana
AT3G51300 10.0kb upstream 10.0kb upstream 11486 true Chr3: 19032887-19044372 Arabidopsis thaliana
AT3G51300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 19032887-19042886 Arabidopsis thaliana
AT3G51300 10.0kb downstream 10.0kb downstream 11486 true Chr3: 19042887-19054372 Arabidopsis thaliana
AT3G51300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 19044373-19054372 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338454 5261 Brassicaceae View MSA
123779027 5264 Brassicales-Malvales View MSA
124277361 5266 SBM View MSA
124253108 5268 Malvidae View MSA
124072956 5270 Rosid View MSA
123751790 5271 Pentapetalae View MSA
122795613 5272 Eudicot View MSA
122049645 5273 Angiosperm View MSA
121348752 5274 Embryophyte View MSA
123426845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.156     Low  
cufflinks 0.256     Low  
cufflinks 0.176     Low  
cufflinks 0.234     Low  
cufflinks 0.101     Low Low
cufflinks 0.647       High

0 Strain