Gene : AT3G51120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Genomic Order:  4129
Name:  ? AT3G51120 Secondary Identifier:  ? PAC:19663990
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G51120 0.5kb upstream 0.5kb upstream 6611 true Chr3: 18985900-18992510 Arabidopsis thaliana
AT3G51120 0.5kb upstream 0.5kb upstream 500 false Chr3: 18992011-18992510 Arabidopsis thaliana
AT3G51120 0.5kb downstream 0.5kb downstream 6611 true Chr3: 18985400-18992010 Arabidopsis thaliana
AT3G51120 0.5kb downstream 0.5kb downstream 500 false Chr3: 18985400-18985899 Arabidopsis thaliana
AT3G51120 1.0kb upstream 1.0kb upstream 7111 true Chr3: 18985900-18993010 Arabidopsis thaliana
AT3G51120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18992011-18993010 Arabidopsis thaliana
AT3G51120 1.0kb downstream 1.0kb downstream 7111 true Chr3: 18984900-18992010 Arabidopsis thaliana
AT3G51120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18984900-18985899 Arabidopsis thaliana
AT3G51120 2.0kb upstream 2.0kb upstream 8111 true Chr3: 18985900-18994010 Arabidopsis thaliana
AT3G51120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18992011-18994010 Arabidopsis thaliana
AT3G51120 2.0kb downstream 2.0kb downstream 8111 true Chr3: 18983900-18992010 Arabidopsis thaliana
AT3G51120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18983900-18985899 Arabidopsis thaliana
AT3G51120 5.0kb upstream 5.0kb upstream 11111 true Chr3: 18985900-18997010 Arabidopsis thaliana
AT3G51120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18992011-18997010 Arabidopsis thaliana
AT3G51120 5.0kb downstream 5.0kb downstream 11111 true Chr3: 18980900-18992010 Arabidopsis thaliana
AT3G51120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18980900-18985899 Arabidopsis thaliana
AT3G51120 10.0kb upstream 10.0kb upstream 16111 true Chr3: 18985900-19002010 Arabidopsis thaliana
AT3G51120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18992011-19002010 Arabidopsis thaliana
AT3G51120 10.0kb downstream 10.0kb downstream 16111 true Chr3: 18975900-18992010 Arabidopsis thaliana
AT3G51120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18975900-18985899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373641 5261 Brassicaceae View MSA
123839615 5264 Brassicales-Malvales View MSA
124348006 5266 SBM View MSA
124253274 5268 Malvidae View MSA
124069496 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.827        
cufflinks 7.398        
cufflinks 5.365       Low
cufflinks 8.466       High
cufflinks 5.568        
cufflinks 7.782        

0 Strain