Protein Family : DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 124253274

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  26

26 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28140.t000007 (1 of 2) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN R. communis v0.1 8648   28140: 46302-54949
orange1.1g047631m.g (1 of 1) PF02201//PF02213//PF03126 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) C. sinensis v1.1 6332   scaffold00225: 150356-156687
AT3G51120 (1 of 1) PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED A. thaliana TAIR10 6111   Chr3: 18985900-18992010
Thhalv10010070m.g (1 of 3) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED E. salsugineum v1.0 5892   scaffold_16: 2077027-2082918
Ciclev10024691m.g (1 of 2) PF02201//PF02213//PF03126 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) C. clementina v1.0 8570   scaffold_7: 1426509-1435078
Lus10014271.g (1 of 4) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN L. usitatissimum v1.0 7239   scaffold275: 146041-153279
Lus10014272.g (1 of 4) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN L. usitatissimum v1.0 4645   scaffold275: 155763-160407
Lus10025973.g (1 of 1) PF00642//PF02201//PF02213//PF03126 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) L. usitatissimum v1.0 6629   scaffold319: 125597-132225
Lus10025974.g (1 of 4) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN L. usitatissimum v1.0 4971   scaffold319: 133540-138510
Gorai.003G011400 (1 of 1) PF02213//PF03126 - GYF domain (GYF) // Plus-3 domain (Plus-3) G. raimondii v2.1 7508   Chr03: 710895-718402
Gorai.007G049500 (1 of 1) PF02201//PF02213 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) G. raimondii v2.1 5434   Chr07: 3454492-3459925
Gorai.007G197200 (1 of 3) PF02201//PF02213//PF03126 - SWIB/MDM2 domain (SWIB) // GYF domain (GYF) // Plus-3 domain (Plus-3) G. raimondii v2.1 7423   Chr07: 19820676-19828098
Thecc1EG000253 (1 of 1) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN T. cacao v1.1 10511   scaffold_1: 1015568-1026078
Araha.1049s0008 (1 of 2) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED A. halleri v1.1 6222   Scaffold1049: 28403-34624
Cagra.0926s0077 (1 of 2) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED C. grandiflora v1.1 6095   Scaffold926: 290170-296264
Brara.I03446 (1 of 3) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED B. rapa FPsc v1.3 6060   A09: 32620618-32626677
Brara.C04351 (1 of 3) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED B. rapa FPsc v1.3 5947   A03: 22948622-22954568
Bostr.6864s0133 (1 of 2) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED B. stricta v1.2 6161   Scaffold6864: 600904-607064
SapurV1A.0487s0280 (1 of 2) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN S. purpurea v1.0 9555   chr05: 7879570-7889124
SapurV1A.0569s0170 (1 of 2) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN S. purpurea v1.0 8868   Scaffold0569: 160796-169663
Manes.02G101200 (1 of 2) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN M. esculenta v6.1 9520   Chromosome02: 7555189-7564708
AL5G31540 (1 of 2) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED A. lyrata v2.1 6323   scaffold_5: 15525641-15531963
Potri.005G117300 (1 of 2) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN P. trichocarpa v3.1 9655   Chr05: 9050699-9060353
Podel.07G018100 (1 of 2) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN P. deltoides WV94 v2.1 9447   Chr07: 1393536-1402982
Podel.05G130600 (1 of 2) PTHR22884:SF339 - PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN P. deltoides WV94 v2.1 9481   Chr05: 9798135-9807615
Carub.0005s1752 (1 of 2) PTHR22884//PTHR22884:SF374 - SET DOMAIN PROTEINS // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED C. rubella v1.1 6541   scaffold_5: 9097930-9104470

26 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28140.m000105 R. communis v0.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Lus10014272 L. usitatissimum v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 4 5268 Malvidae
Lus10014271 L. usitatissimum v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 4 5268 Malvidae
Gorai.003G011400.1 G. raimondii v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 3 5268 Malvidae
Bostr.6864s0133.1.p B. stricta v1.2 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
AL5G31540.t1 A. lyrata v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Potri.005G117300.1.p P. trichocarpa v3.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Podel.05G130600.1.p P. deltoides WV94 v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
orange1.1g047631m C. sinensis v1.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
AT3G51120.1 A. thaliana TAIR10 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Thhalv10010070m E. salsugineum v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Ciclev10024691m C. clementina v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Lus10025974 L. usitatissimum v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 4 5268 Malvidae
Lus10025973 L. usitatissimum v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 4 5268 Malvidae
Gorai.007G049500.1 G. raimondii v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 3 5268 Malvidae
Gorai.007G197200.1 G. raimondii v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 3 5268 Malvidae
Thecc1EG000253t1 T. cacao v1.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Araha.1049s0008.1.p A. halleri v1.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Cagra.0926s0077.1.p C. grandiflora v1.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Brara.I03446.1.p B. rapa FPsc v1.3 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
Brara.C04351.1.p B. rapa FPsc v1.3 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
SapurV1A.0487s0280.1.p S. purpurea v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
SapurV1A.0569s0170.1.p S. purpurea v1.0 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
Manes.02G101200.1.p M. esculenta v6.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae
Podel.07G018100.1.p P. deltoides WV94 v2.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 2 5268 Malvidae
Carub.0005s1752.1.p C. rubella v1.1 124253274 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 1 5268 Malvidae