Gene : Thecc1EG000253 T. cacao v1.1
Defline:  (1 of 1) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Genomic Order:  218
Name:  ? Thecc1EG000253 Secondary Identifier:  ? PAC:27437365
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000253 0.5kb upstream 0.5kb upstream 11011 true scaffold_1: 1015068-1026078 Theobroma cacao
Thecc1EG000253 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1015068-1015567 Theobroma cacao
Thecc1EG000253 0.5kb downstream 0.5kb downstream 11011 true scaffold_1: 1015568-1026578 Theobroma cacao
Thecc1EG000253 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1026079-1026578 Theobroma cacao
Thecc1EG000253 1.0kb upstream 1.0kb upstream 11511 true scaffold_1: 1014568-1026078 Theobroma cacao
Thecc1EG000253 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1014568-1015567 Theobroma cacao
Thecc1EG000253 1.0kb downstream 1.0kb downstream 11511 true scaffold_1: 1015568-1027078 Theobroma cacao
Thecc1EG000253 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1026079-1027078 Theobroma cacao
Thecc1EG000253 2.0kb upstream 2.0kb upstream 12511 true scaffold_1: 1013568-1026078 Theobroma cacao
Thecc1EG000253 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1013568-1015567 Theobroma cacao
Thecc1EG000253 2.0kb downstream 2.0kb downstream 12511 true scaffold_1: 1015568-1028078 Theobroma cacao
Thecc1EG000253 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1026079-1028078 Theobroma cacao
Thecc1EG000253 5.0kb upstream 5.0kb upstream 15511 true scaffold_1: 1010568-1026078 Theobroma cacao
Thecc1EG000253 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1010568-1015567 Theobroma cacao
Thecc1EG000253 5.0kb downstream 5.0kb downstream 15511 true scaffold_1: 1015568-1031078 Theobroma cacao
Thecc1EG000253 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1026079-1031078 Theobroma cacao
Thecc1EG000253 10.0kb upstream 10.0kb upstream 20511 true scaffold_1: 1005568-1026078 Theobroma cacao
Thecc1EG000253 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1005568-1015567 Theobroma cacao
Thecc1EG000253 10.0kb downstream 10.0kb downstream 20511 true scaffold_1: 1015568-1036078 Theobroma cacao
Thecc1EG000253 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1026079-1036078 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839615 5264 Brassicales-Malvales View MSA
124348006 5266 SBM View MSA
124253274 5268 Malvidae View MSA
124069496 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain