Gene : HAL3A A. thaliana TAIR10
Primary Identifier:  ? AT3G18030 Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase
Genomic Order:  1859 Name:  ? AT3G18030
Secondary Identifier:  ? PAC:19661884
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana COA-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18030 0.5kb upstream 0.5kb upstream 1809 true Chr3: 6167640-6169448 Arabidopsis thaliana
AT3G18030 0.5kb upstream 0.5kb upstream 500 false Chr3: 6168949-6169448 Arabidopsis thaliana
AT3G18030 0.5kb downstream 0.5kb downstream 1809 true Chr3: 6167140-6168948 Arabidopsis thaliana
AT3G18030 0.5kb downstream 0.5kb downstream 500 false Chr3: 6167140-6167639 Arabidopsis thaliana
AT3G18030 1.0kb upstream 1.0kb upstream 2309 true Chr3: 6167640-6169948 Arabidopsis thaliana
AT3G18030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6168949-6169948 Arabidopsis thaliana
AT3G18030 1.0kb downstream 1.0kb downstream 2309 true Chr3: 6166640-6168948 Arabidopsis thaliana
AT3G18030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6166640-6167639 Arabidopsis thaliana
AT3G18030 2.0kb upstream 2.0kb upstream 3309 true Chr3: 6167640-6170948 Arabidopsis thaliana
AT3G18030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6168949-6170948 Arabidopsis thaliana
AT3G18030 2.0kb downstream 2.0kb downstream 3309 true Chr3: 6165640-6168948 Arabidopsis thaliana
AT3G18030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6165640-6167639 Arabidopsis thaliana
AT3G18030 5.0kb upstream 5.0kb upstream 6309 true Chr3: 6167640-6173948 Arabidopsis thaliana
AT3G18030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6168949-6173948 Arabidopsis thaliana
AT3G18030 5.0kb downstream 5.0kb downstream 6309 true Chr3: 6162640-6168948 Arabidopsis thaliana
AT3G18030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6162640-6167639 Arabidopsis thaliana
AT3G18030 10.0kb upstream 10.0kb upstream 11309 true Chr3: 6167640-6178948 Arabidopsis thaliana
AT3G18030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6168949-6178948 Arabidopsis thaliana
AT3G18030 10.0kb downstream 10.0kb downstream 11309 true Chr3: 6157640-6168948 Arabidopsis thaliana
AT3G18030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6157640-6167639 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361145 5261 Brassicaceae View MSA
123840077 5264 Brassicales-Malvales View MSA
124350306 5266 SBM View MSA
124242007 5268 Malvidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.907       Low
cufflinks 16.091        
cufflinks 7.799        
cufflinks 17.108       High
cufflinks 7.474        
cufflinks 14.677        

0 Strain