Gene : AT3G15830 A. thaliana TAIR10
Defline:  (1 of 5) PF14360 - PAP2 superfamily C-terminal (PAP2_C) Genomic Order:  1622
Name:  ? AT3G15830 Secondary Identifier:  ? PAC:19665089
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15830 0.5kb upstream 0.5kb upstream 1951 true Chr3: 5354474-5356424 Arabidopsis thaliana
AT3G15830 0.5kb upstream 0.5kb upstream 500 false Chr3: 5354474-5354973 Arabidopsis thaliana
AT3G15830 0.5kb downstream 0.5kb downstream 1951 true Chr3: 5354974-5356924 Arabidopsis thaliana
AT3G15830 0.5kb downstream 0.5kb downstream 500 false Chr3: 5356425-5356924 Arabidopsis thaliana
AT3G15830 1.0kb upstream 1.0kb upstream 2451 true Chr3: 5353974-5356424 Arabidopsis thaliana
AT3G15830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5353974-5354973 Arabidopsis thaliana
AT3G15830 1.0kb downstream 1.0kb downstream 2451 true Chr3: 5354974-5357424 Arabidopsis thaliana
AT3G15830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5356425-5357424 Arabidopsis thaliana
AT3G15830 2.0kb upstream 2.0kb upstream 3451 true Chr3: 5352974-5356424 Arabidopsis thaliana
AT3G15830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5352974-5354973 Arabidopsis thaliana
AT3G15830 2.0kb downstream 2.0kb downstream 3451 true Chr3: 5354974-5358424 Arabidopsis thaliana
AT3G15830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5356425-5358424 Arabidopsis thaliana
AT3G15830 5.0kb upstream 5.0kb upstream 6451 true Chr3: 5349974-5356424 Arabidopsis thaliana
AT3G15830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5349974-5354973 Arabidopsis thaliana
AT3G15830 5.0kb downstream 5.0kb downstream 6451 true Chr3: 5354974-5361424 Arabidopsis thaliana
AT3G15830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5356425-5361424 Arabidopsis thaliana
AT3G15830 10.0kb upstream 10.0kb upstream 11451 true Chr3: 5344974-5356424 Arabidopsis thaliana
AT3G15830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5344974-5354973 Arabidopsis thaliana
AT3G15830 10.0kb downstream 10.0kb downstream 11451 true Chr3: 5354974-5366424 Arabidopsis thaliana
AT3G15830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5356425-5366424 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029092 5273 Angiosperm View MSA
122381624 5261 Brassicaceae View MSA
123827655 5264 Brassicales-Malvales View MSA
124345808 5266 SBM View MSA
124242573 5268 Malvidae View MSA
124065799 5270 Rosid View MSA
123741038 5271 Pentapetalae View MSA
122789813 5272 Eudicot View MSA
121348146 5274 Embryophyte View MSA
123380744 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low Low
cufflinks 1.078       High
cufflinks 0.107     Low  
cufflinks 0.544        
cufflinks 0.308        
cufflinks 0.341        

0 Strain